RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 NFRKBQ6P4R8 1299 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 SLC47A2Q86VL8 602 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 DNAAF5Q86Y56 855 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 CEP120Q8N960 986 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 LRRC57Q8N9N7 239 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 NLRP7Q8WX94 980 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 RFFLQ8WZ73 363 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 DDX1Q92499 740 aaKnown RBP12.77□□□□□ -0.37
TRIM40-205ENST00000307859 DHX38Q92620 1227 aaKnown RBP12.77□□□□□ -0.37
TRIM40-205ENST00000307859 RABGGTAQ92696 567 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 ELMO3Q96BJ8 720 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 TLR10Q9BXR5 811 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 AP5M1Q9H0R1 490 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 ISCUQ9H1K1 167 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 APOBEC3GQ9HC16 384 aaKnown RBP12.77□□□□□ -0.37
TRIM40-205ENST00000307859 TAS2R14Q9NYV8 317 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 PUF60Q9UHX1 559 aaKnown RBP12.77□□□□□ -0.37
TRIM40-205ENST00000307859 HYOU1Q9Y4L1 999 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 COL6A3P12111 3177 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 SMIM35A0A1B0GVV1 85 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 CTAGE15A4D2H0 777 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 ANKRD62A6NC57 917 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 TSPAN1O60635 241 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 SRGAP2O75044 1071 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 IL18RAPO95256 599 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 ASS1P00966 412 aaKnown RBP12.76□□□□□ -0.37
TRIM40-205ENST00000307859 CTAGE8P0CG41 777 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 GZMAP12544 262 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 AKR1A1P14550 325 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 ARF4P18085 180 aaPredicted RBP12.76□□□□□ -0.37
TRIM40-205ENST00000307859 TBXAS1P24557 533 aaPredicted RBP12.76□□□□□ -0.37
TRIM40-205ENST00000307859 PSEN2P49810 448 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 PDE6CP51160 858 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 NOP14P78316 857 aaKnown RBP12.76□□□□□ -0.37
TRIM40-205ENST00000307859 IRX5P78411 483 aaPredicted RBP12.76□□□□□ -0.37
TRIM40-205ENST00000307859 CDC42EP1Q00587 391 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 FMO1Q01740 532 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 CDR2Q01850 454 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 CUL2Q13617 745 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 TCEAL1Q15170 157 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 KYAT1Q16773 422 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 DUOXA2Q1HG44 320 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 MEI1Q5TIA1 1274 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 SPOPLQ6IQ16 392 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 CTAGE6Q86UF2 777 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 CTAGE4Q8IX94 777 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 EFCAB13Q8IY85 973 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 THNSL1Q8IYQ7 743 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 TPCN2Q8NHX9 752 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 PPP1R16BQ96T49 567 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 PCDHB18PQ96TA0 734 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 ARID3AQ99856 593 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 GDF15Q99988 308 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 MTMR12Q9C0I1 747 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 ADAMTS10Q9H324 1103 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 CNTN6Q9UQ52 1028 aa12.76□□□□□ -0.37
TRIM40-205ENST00000307859 PHACTR2O75167 634 aa12.75□□□□□ -0.37
TRIM40-205ENST00000307859 RTN2O75298 545 aa12.75□□□□□ -0.37
TRIM40-205ENST00000307859 DUSP11O75319 330 aaKnown RBP12.75□□□□□ -0.37
TRIM40-205ENST00000307859 CXCL8P10145 99 aa12.75□□□□□ -0.37
TRIM40-205ENST00000307859 CYBAP13498 195 aa12.75□□□□□ -0.37
TRIM40-205ENST00000307859 ACO1P21399 889 aaKnown RBP12.75□□□□□ -0.37
TRIM40-205ENST00000307859 PSMC4P43686 418 aa12.75□□□□□ -0.37
TRIM40-205ENST00000307859 TEX35Q5T0J7 233 aa12.75□□□□□ -0.37
TRIM40-205ENST00000307859 ZNF572Q7Z3I7 529 aaPredicted RBP12.75□□□□□ -0.37
TRIM40-205ENST00000307859 SLFN11Q7Z7L1 901 aa12.75□□□□□ -0.37
TRIM40-205ENST00000307859 CDR2LQ86X02 465 aaPredicted RBP12.75□□□□□ -0.37
TRIM40-205ENST00000307859 UBR7Q8N806 425 aa12.75□□□□□ -0.37
TRIM40-205ENST00000307859 TRPV1Q8NER1 839 aa12.75□□□□□ -0.37
TRIM40-205ENST00000307859 CTNNBL1Q8WYA6 563 aaPredicted RBP12.75□□□□□ -0.37
TRIM40-205ENST00000307859 RPGRIP1Q96KN7 1286 aa12.75□□□□□ -0.37
TRIM40-205ENST00000307859 OSBPL9Q96SU4 736 aa12.75□□□□□ -0.37
TRIM40-205ENST00000307859 KATNAL1Q9BW62 490 aa12.75□□□□□ -0.37
TRIM40-205ENST00000307859 RPF1Q9H9Y2 349 aaKnown RBP12.75□□□□□ -0.37
TRIM40-205ENST00000307859 SEPT11Q9NVA2 429 aaKnown RBP12.75□□□□□ -0.37
TRIM40-205ENST00000307859 NUB1Q9Y5A7 615 aa12.75□□□□□ -0.37
TRIM40-205ENST00000307859 CENPFP49454 3210 aa12.75□□□□□ -0.37
TRIM40-205ENST00000307859 A0A1B0GUA9 196 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 TMCO5BA8MYB1 307 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 ZNF185O15231 689 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 MEFVO15553 781 aaPredicted RBP12.74□□□□□ -0.37
TRIM40-205ENST00000307859 NCK2O43639 380 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 GPR32O75388 356 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 CSDE1O75534 798 aaKnown RBP12.74□□□□□ -0.37
TRIM40-205ENST00000307859 ERLIN2O94905 339 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 MMEP08473 750 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 CCL5P13501 91 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 KRT5P13647 590 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 H2AFXP16104 143 aaPredicted RBP12.74□□□□□ -0.37
TRIM40-205ENST00000307859 HOXD10P28358 340 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 HOXC8P31273 242 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 GRK4P32298 578 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 HADHBP55084 474 aaKnown RBP12.74□□□□□ -0.37
TRIM40-205ENST00000307859 BPIFB4P59827 614 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 RBM10P98175 930 aaKnown RBP12.74□□□□□ -0.37
TRIM40-205ENST00000307859 HIC1Q14526 733 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 FSCN1Q16658 493 aaKnown RBP12.74□□□□□ -0.37
TRIM40-205ENST00000307859 ZNF677Q86XU0 584 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 CREG2Q8IUH2 290 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 TMEM192Q8IY95 271 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms