RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ATG4AQ8WYN0 398 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 MAGEF1Q9HAY2 307 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 PRKAG2Q9UGJ0 569 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 IP6K2Q9UHH9 426 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 IPO5O00410 1097 aaKnown RBP13.28□□□□□ -0.28
USP38-201ENST00000307017 MAP3K7CLP57077 242 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 PTK7Q13308 1070 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 ATP1A4Q13733 1029 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 WRNIP1Q96S55 665 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 PI4KBQ9UBF8 816 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.28□□□□□ -0.28
USP38-201ENST00000307017 RECQLP46063 649 aaPredicted RBP13.28□□□□□ -0.28
USP38-201ENST00000307017 TMED10P49755 219 aaKnown RBP13.28□□□□□ -0.28
USP38-201ENST00000307017 RCN1Q15293 331 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 FAM71DQ8N9W8 422 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 AGPAT1Q99943 283 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 SLC8A2Q9UPR5 921 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 LGR5O75473 907 aa13.27□□□□□ -0.28
USP38-201ENST00000307017 FOSL2P15408 326 aa13.27□□□□□ -0.28
USP38-201ENST00000307017 AKT1P31749 480 aa13.27□□□□□ -0.28
USP38-201ENST00000307017 NUDT2P50583 147 aa13.27□□□□□ -0.28
USP38-201ENST00000307017 MAPK6Q16659 721 aa13.27□□□□□ -0.28
USP38-201ENST00000307017 NAALADL2Q58DX5 795 aa13.27□□□□□ -0.28
USP38-201ENST00000307017 MFSD4BQ5TF39 518 aa13.27□□□□□ -0.28
USP38-201ENST00000307017 XXYLT1Q8NBI6 393 aa13.27□□□□□ -0.28
USP38-201ENST00000307017 NOA1Q8NC60 698 aaKnown RBP13.27□□□□□ -0.28
USP38-201ENST00000307017 HES6Q96HZ4 224 aa13.27□□□□□ -0.28
USP38-201ENST00000307017 CAPN15O75808 1086 aa13.27□□□□□ -0.28
USP38-201ENST00000307017 NAIF1Q69YI7 327 aaPredicted RBP13.27□□□□□ -0.28
USP38-201ENST00000307017 ARHGAP10A1A4S6 786 aa13.27□□□□□ -0.28
USP38-201ENST00000307017 IFNAR1P17181 557 aa13.27□□□□□ -0.28
USP38-201ENST00000307017 HNRNPH1P31943 449 aaKnown RBP13.27□□□□□ -0.28
USP38-201ENST00000307017 OTUD4Q01804 1114 aaKnown RBP13.27□□□□□ -0.28
USP38-201ENST00000307017 E4F1Q66K89 784 aaPredicted RBP13.27□□□□□ -0.28
USP38-201ENST00000307017 PIDD1Q9HB75 910 aa13.27□□□□□ -0.28
USP38-201ENST00000307017 ZFATQ9P243 1243 aa13.27□□□□□ -0.28
USP38-201ENST00000307017 KIAA0232Q92628 1395 aa13.27□□□□□ -0.29
USP38-201ENST00000307017 KLHL18O94889 574 aa13.27□□□□□ -0.29
USP38-201ENST00000307017 FXR1P51114 621 aaKnown RBP eCLIP13.27□□□□□ -0.29
USP38-201ENST00000307017 ARL6IP4Q66PJ3 421 aaKnown RBP13.27□□□□□ -0.29
USP38-201ENST00000307017 OTOAQ7RTW8 1153 aa13.27□□□□□ -0.29
USP38-201ENST00000307017 GLMNQ92990 594 aa13.27□□□□□ -0.29
USP38-201ENST00000307017 OTUD5Q96G74 571 aa13.27□□□□□ -0.29
USP38-201ENST00000307017 TMEM120BA0PK00 339 aa13.27□□□□□ -0.29
USP38-201ENST00000307017 FGFR2P21802 821 aa13.27□□□□□ -0.29
USP38-201ENST00000307017 FGFR3P22607 806 aa13.27□□□□□ -0.29
USP38-201ENST00000307017 ANKRD49Q8WVL7 239 aa13.27□□□□□ -0.29
USP38-201ENST00000307017 NEU2Q9Y3R4 380 aa13.27□□□□□ -0.29
USP38-201ENST00000307017 PKP3Q9Y446 797 aa13.27□□□□□ -0.29
USP38-201ENST00000307017 N6AMT1Q9Y5N5 214 aa13.27□□□□□ -0.29
USP38-201ENST00000307017 PZPP20742 1482 aa13.27□□□□□ -0.29
USP38-201ENST00000307017 RNF103O00237 685 aa13.27□□□□□ -0.29
USP38-201ENST00000307017 SH3BGRLO75368 114 aa13.27□□□□□ -0.29
USP38-201ENST00000307017 OSBPL10Q9BXB5 764 aa13.27□□□□□ -0.29
USP38-201ENST00000307017 PGS1Q32NB8 556 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 EXD1Q8NHP7 514 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 ROGDIQ9GZN7 287 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 METTL5Q9NRN9 209 aaKnown RBP13.26□□□□□ -0.29
USP38-201ENST00000307017 RPAP1Q9BWH6 1393 aaPredicted RBP13.26□□□□□ -0.29
USP38-201ENST00000307017 SEMA3EO15041 775 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 TPI1P60174 286 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 KYNUQ16719 465 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 PFKFB3Q16875 520 aaPredicted RBP13.26□□□□□ -0.29
USP38-201ENST00000307017 MFN1Q8IWA4 741 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 OR8H2Q8N162 312 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 CENPTQ96BT3 561 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 PKD2L2Q9NZM6 624 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 SLAIN2Q9P270 581 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 ADD3Q9UEY8 706 aaKnown RBP13.26□□□□□ -0.29
USP38-201ENST00000307017 PTPRTO14522 1441 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 RAP1GAPP47736 663 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 DYNC1I2Q13409 638 aaKnown RBP13.26□□□□□ -0.29
USP38-201ENST00000307017 TMEM35BQ8NCS4 154 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 CEP41Q9BYV8 373 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 MUC3BQ9H195 1237 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 FHOD1Q9Y613 1164 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 HOXB7P09629 217 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 ITGA8P53708 1063 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 SYTL3Q4VX76 610 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 STRBPQ96SI9 672 aaKnown RBP13.26□□□□□ -0.29
USP38-201ENST00000307017 RBM15Q96T37 977 aaKnown RBP eCLIP13.26□□□□□ -0.293e-6■■□□□ 11.8
USP38-201ENST00000307017 QTRT2Q9H974 415 aaKnown RBP13.26□□□□□ -0.29
USP38-201ENST00000307017 HERC5Q9UII4 1024 aaKnown RBP13.26□□□□□ -0.29
USP38-201ENST00000307017 ZC3H4Q9UPT8 1303 aaKnown RBP13.26□□□□□ -0.29
USP38-201ENST00000307017 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.26□□□□□ -0.29
USP38-201ENST00000307017 MZF1P28698 734 aaPredicted RBP13.26□□□□□ -0.29
USP38-201ENST00000307017 CIITAP33076 1130 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 CTCFP49711 727 aaPredicted RBP13.26□□□□□ -0.29
USP38-201ENST00000307017 ZNF235Q14590 738 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 MEI1Q5TIA1 1274 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 PATL1Q86TB9 770 aaKnown RBP13.26□□□□□ -0.29
USP38-201ENST00000307017 SCG3Q8WXD2 468 aaKnown RBP13.26□□□□□ -0.29
USP38-201ENST00000307017 C18orf8Q96DM3 657 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 CNDP1Q96KN2 507 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 PNKPQ96T60 521 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 KLHL25Q9H0H3 589 aa13.26□□□□□ -0.29
USP38-201ENST00000307017 APOA1P02647 267 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 LSP1P33241 339 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 STX3Q13277 289 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 MED21Q13503 144 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms