RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 RUBCNQ92622 972 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 KRT35Q92764 455 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 CD101Q93033 1021 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 JPH2Q9BR39 696 aaPredicted RBP7.02□□□□□ -1.29
USP47-201ENST00000305481 SELENOOQ9BVL4 669 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 TTC7AQ9ULT0 858 aaPredicted RBP7.02□□□□□ -1.29
USP47-201ENST00000305481 IVNS1ABPQ9Y6Y0 642 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 ESYT3A0FGR9 886 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 PGRMC1O00264 195 aaKnown RBP7.02□□□□□ -1.29
USP47-201ENST00000305481 PPFIA4O75335 1185 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 ASS1P00966 412 aaKnown RBP7.02□□□□□ -1.29
USP47-201ENST00000305481 PEX5P50542 639 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 OSTNP61366 133 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 TFDP1Q14186 410 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 FAM110CQ1W6H9 321 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 CCDC70Q6NSX1 233 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 AADACL2Q6P093 401 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 KLHL7Q8IXQ5 586 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 THNSL1Q8IYQ7 743 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 FAM81BQ96LP2 452 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 PPP1R16BQ96T49 567 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 TINF2Q9BSI4 451 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 NUP85Q9BW27 656 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 NFKBIZQ9BYH8 718 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 CDT1Q9H211 546 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 GTF3C4Q9UKN8 822 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 MGAMO43451 1857 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 A0A087WZ62 844 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 TMEM110-MUSTN1A8MSY1 372 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 GPR25O00155 361 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 ASAP2O43150 1006 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 VTNP04004 478 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 CYP1A1P04798 512 aaPredicted RBP7.01□□□□□ -1.29
USP47-201ENST00000305481 HOXD8P13378 290 aaPredicted RBP7.01□□□□□ -1.29
USP47-201ENST00000305481 COMTP21964 271 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 TNFRSF8P28908 595 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 OAS2P29728 719 aaKnown RBP7.01□□□□□ -1.29
USP47-201ENST00000305481 SSTR3P32745 418 aaPredicted RBP7.01□□□□□ -1.29
USP47-201ENST00000305481 CARSP49589 748 aaKnown RBP7.01□□□□□ -1.29
USP47-201ENST00000305481 MYL6P60660 151 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 ZNF211Q13398 564 aaPredicted RBP7.01□□□□□ -1.29
USP47-201ENST00000305481 MESDQ14696 234 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 C2CD6Q53TS8 623 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 LLGL2Q6P1M3 1020 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 TMEM270Q6UE05 265 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 PLEKHH3Q7Z736 793 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 MCOLN2Q8IZK6 566 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 ZNF653Q96CK0 615 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 FAM212AQ96EL1 285 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 CYFIP2Q96F07 1278 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 PARK7Q99497 189 aaKnown RBP7.01□□□□□ -1.29
USP47-201ENST00000305481 FDXACB1Q9BRP7 624 aaPredicted RBP7.01□□□□□ -1.29
USP47-201ENST00000305481 TRIM7Q9C029 511 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 XYLT2Q9H1B5 865 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 HPCAL4Q9UM19 191 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 BHMG1C9JSJ3 638 aaPredicted RBP7.01□□□□□ -1.29
USP47-201ENST00000305481 H3BRB1 525 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 SART1O43290 800 aaKnown RBP7.01□□□□□ -1.29
USP47-201ENST00000305481 PHACTR2O75167 634 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 ECM2O94769 699 aaPredicted RBP7.01□□□□□ -1.29
USP47-201ENST00000305481 HEXIM1O94992 359 aaKnown RBP7.01□□□□□ -1.29
USP47-201ENST00000305481 FGGP02679 453 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 ZNF132P52740 706 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 GUCY2DQ02846 1103 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 ACVR2BQ13705 512 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 ZNF568Q3ZCX4 644 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 DUSP28Q4G0W2 176 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 PRAMEF19Q5SWL8 479 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 MTHFD1LQ6UB35 978 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 ZNF677Q86XU0 584 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 ZNF564Q8TBZ8 553 aaPredicted RBP7.01□□□□□ -1.29
USP47-201ENST00000305481 CALR3Q96L12 384 aaKnown RBP7.01□□□□□ -1.29
USP47-201ENST00000305481 RNPC3Q96LT9 517 aaKnown RBP7.01□□□□□ -1.29
USP47-201ENST00000305481 DDX47Q9H0S4 455 aaKnown RBP7.01□□□□□ -1.29
USP47-201ENST00000305481 CARD9Q9H257 536 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 TUT1Q9H6E5 874 aaKnown RBP7.01□□□□□ -1.29
USP47-201ENST00000305481 EPB41L5Q9HCM4 733 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 CPA4Q9UI42 421 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 TNFSF13BQ9Y275 285 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 PCDHB4Q9Y5E5 795 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 ANK1P16157 1881 aa7.01□□□□□ -1.29
USP47-201ENST00000305481 DNAH12Q6ZR08 3092 aa7□□□□□ -1.29
USP47-201ENST00000305481 IGF2BP3O00425 579 aaKnown RBP eCLIP7□□□□□ -1.29
USP47-201ENST00000305481 KRIT1O00522 736 aa7□□□□□ -1.29
USP47-201ENST00000305481 ITGBL1O95965 494 aaPredicted RBP7□□□□□ -1.29
USP47-201ENST00000305481 MMP3P08254 477 aa7□□□□□ -1.29
USP47-201ENST00000305481 AP3M2P53677 418 aa7□□□□□ -1.29
USP47-201ENST00000305481 POU5F1BQ06416 359 aa7□□□□□ -1.29
USP47-201ENST00000305481 FAM187BQ17R55 369 aa7□□□□□ -1.29
USP47-201ENST00000305481 DUOXA2Q1HG44 320 aa7□□□□□ -1.29
USP47-201ENST00000305481 MAP9Q49MG5 647 aa7□□□□□ -1.29
USP47-201ENST00000305481 NAA35Q5VZE5 725 aa7□□□□□ -1.29
USP47-201ENST00000305481 PHLDB2Q86SQ0 1253 aa7□□□□□ -1.29
USP47-201ENST00000305481 IFNLR1Q8IU57 520 aaPredicted RBP7□□□□□ -1.29
USP47-201ENST00000305481 ZDHHC14Q8IZN3 488 aa7□□□□□ -1.29
USP47-201ENST00000305481 RBBP8NLQ8NC74 664 aaPredicted RBP7□□□□□ -1.29
USP47-201ENST00000305481 CASKIN2Q8WXE0 1202 aa7□□□□□ -1.29
USP47-201ENST00000305481 RPS6KC1Q96S38 1066 aa7□□□□□ -1.29
USP47-201ENST00000305481 ZSWIM1Q9BR11 485 aa7□□□□□ -1.29
USP47-201ENST00000305481 VIPAS39Q9H9C1 493 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms