RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 CACNA2D4Q7Z3S7 1137 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 KRT25Q7Z3Z0 450 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 MAP4K3Q8IVH8 894 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 ZBTB8OSQ8IWT0 167 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 ZNF461Q8TAF7 563 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 ZSCAN18Q8TBC5 510 aaPredicted RBP11.13□□□□□ -0.63
COL4A3-201ENST00000304990 TCEAL4Q96EI5 215 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 ZNF512Q96ME7 567 aaPredicted RBP11.13□□□□□ -0.63
COL4A3-201ENST00000304990 POLR3FQ9H1D9 316 aaPredicted RBP11.13□□□□□ -0.63
COL4A3-201ENST00000304990 XPNPEP1Q9NQW7 623 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 PRMT7Q9NVM4 692 aaPredicted RBP11.13□□□□□ -0.63
COL4A3-201ENST00000304990 BACE2Q9Y5Z0 518 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 CHD8Q9HCK8 2581 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 ARHGEF37A1IGU5 675 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 WDR27A2RRH5 827 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 K7ESF4 209 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 PTGESO14684 152 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 TBX3O15119 743 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 CCNT1O60563 726 aaKnown RBP11.12□□□□□ -0.63
COL4A3-201ENST00000304990 RPP40O75818 363 aaKnown RBP11.12□□□□□ -0.63
COL4A3-201ENST00000304990 IFNAR1P17181 557 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 GLRA2P23416 452 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 NOVA1P51513 510 aaKnown RBP11.12□□□□□ -0.63
COL4A3-201ENST00000304990 ROR1Q01973 937 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 GAS6Q14393 721 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 BLOC1S2Q6QNY1 142 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 Q6ZS52 159 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 NEK8Q86SG6 692 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 WDR5BQ86VZ2 330 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 NOSTRINQ8IVI9 506 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 MFSD6LQ8IWD5 586 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 RASEFQ8IZ41 740 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 E2F7Q96AV8 911 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 DDX27Q96GQ7 796 aaKnown RBP11.12□□□□□ -0.63
COL4A3-201ENST00000304990 LOXL4Q96JB6 756 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 PRIMPOLQ96LW4 560 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 JAKMIP1Q96N16 626 aaKnown RBP11.12□□□□□ -0.63
COL4A3-201ENST00000304990 UROC1Q96N76 676 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 NAP1L4Q99733 375 aaKnown RBP11.12□□□□□ -0.63
COL4A3-201ENST00000304990 LSM14BQ9BX40 385 aaKnown RBP11.12□□□□□ -0.63
COL4A3-201ENST00000304990 NFKBIZQ9BYH8 718 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 C8orf33Q9H7E9 229 aaPredicted RBP11.12□□□□□ -0.63
COL4A3-201ENST00000304990 RXFP3Q9NSD7 469 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 GDAQ9Y2T3 454 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 INSL5Q9Y5Q6 135 aa11.12□□□□□ -0.63
COL4A3-201ENST00000304990 KIF26AQ9ULI4 1882 aaPredicted RBP11.11□□□□□ -0.63
COL4A3-201ENST00000304990 HEPACAM2A8MVW5 462 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 H7C4K7 107 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 CPLX1O14810 134 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 TM4SF5O14894 197 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 USO1O60763 962 aaKnown RBP11.11□□□□□ -0.63
COL4A3-201ENST00000304990 MICAL2O94851 1124 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 EPN2O95208 641 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 PAPSS2O95340 614 aaPredicted RBP11.11□□□□□ -0.63
COL4A3-201ENST00000304990 DEXIO95424 95 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 PRKCBP05771 671 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 GCFC2P16383 781 aaKnown RBP11.11□□□□□ -0.63
COL4A3-201ENST00000304990 GJA1P17302 382 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 ARL2P36404 184 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 BRCC3P46736 316 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 SOX9P48436 509 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 CLCNKBP51801 687 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 ZNF252P-AS1Q0IIN9 211 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 PRPF4BQ13523 1007 aaKnown RBP11.11□□□□□ -0.63
COL4A3-201ENST00000304990 NTRK3Q16288 839 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 TSGA10IPQ3SY00 556 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 GLRA4Q5JXX5 417 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 GALNT17Q6IS24 598 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 HAUS6Q7Z4H7 955 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 SKAP1Q86WV1 359 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 HS6ST3Q8IZP7 471 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 LEMD2Q8NC56 503 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 TTC8Q8TAM2 541 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 GAB3Q8WWW8 586 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 ZSWIM3Q96MP5 696 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 GPR88Q9GZN0 384 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 SMOC1Q9H4F8 434 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 NCOA5Q9HCD5 579 aaKnown RBP11.11□□□□□ -0.63
COL4A3-201ENST00000304990 KCNMB3Q9NPA1 279 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 ASAH2Q9NR71 780 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 VPS45Q9NRW7 570 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 NID2Q14112 1375 aa11.11□□□□□ -0.63
COL4A3-201ENST00000304990 TMEM8BA6NDV4 472 aa11.1□□□□□ -0.63
COL4A3-201ENST00000304990 SPECC1L-ADORA2AF8WAN1 911 aa11.1□□□□□ -0.63
COL4A3-201ENST00000304990 TMEM189-UBE2V1I3L0A0 370 aa11.1□□□□□ -0.63
COL4A3-201ENST00000304990 DPYSL4O14531 572 aa11.1□□□□□ -0.63
COL4A3-201ENST00000304990 ATF2P15336 505 aa11.1□□□□□ -0.63
COL4A3-201ENST00000304990 MPLP40238 635 aa11.1□□□□□ -0.63
COL4A3-201ENST00000304990 CCR2P41597 374 aa11.1□□□□□ -0.63
COL4A3-201ENST00000304990 PXNP49023 591 aaPredicted RBP11.1□□□□□ -0.63
COL4A3-201ENST00000304990 RBM25P49756 843 aaKnown RBP11.1□□□□□ -0.63
COL4A3-201ENST00000304990 MLLT6P55198 1093 aaPredicted RBP11.1□□□□□ -0.63
COL4A3-201ENST00000304990 TWF1Q12792 350 aa11.1□□□□□ -0.63
COL4A3-201ENST00000304990 PON2Q15165 354 aa11.1□□□□□ -0.63
COL4A3-201ENST00000304990 TEAD2Q15562 447 aa11.1□□□□□ -0.63
COL4A3-201ENST00000304990 MAPK6Q16659 721 aa11.1□□□□□ -0.63
COL4A3-201ENST00000304990 DAB2IPQ5VWQ8 1189 aa11.1□□□□□ -0.63
COL4A3-201ENST00000304990 APBB1IPQ7Z5R6 666 aaPredicted RBP11.1□□□□□ -0.63
COL4A3-201ENST00000304990 KBTBD6Q86V97 674 aa11.1□□□□□ -0.63
COL4A3-201ENST00000304990 SLFN12Q8IYM2 578 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms