RNA–Protein interactions for RNA: ENST00000304623.12

CTNND2-201, Transcript of catenin delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND2, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-201ENST00000304623 KIF12Q96FN5 646 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 KCND2Q9NZV8 630 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 NPHP4O75161 1426 aaPredicted RBP20.88■□□□□ 0.93
CTNND2-201ENST00000304623 SAMD9LQ8IVG5 1584 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 PJA2O43164 708 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 MOCS2O96007 188 aaPredicted RBP20.88■□□□□ 0.93
CTNND2-201ENST00000304623 APRTP07741 180 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 ATXN8OSP0DMR3 200 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 SETD3Q86TU7 594 aaPredicted RBP20.88■□□□□ 0.93
CTNND2-201ENST00000304623 USP38Q8NB14 1042 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 ACAD9Q9H845 621 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 DFFAO00273 331 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 CCDC85BQ15834 202 aaPredicted RBP20.88■□□□□ 0.93
CTNND2-201ENST00000304623 URGCPQ8TCY9 931 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 TMA16Q96EY4 203 aaKnown RBP20.88■□□□□ 0.93
CTNND2-201ENST00000304623 SPON2Q9BUD6 331 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 QTRT2Q9H974 415 aaKnown RBP20.88■□□□□ 0.93
CTNND2-201ENST00000304623 PLEKHA5Q9HAU0 1116 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 RAB6BQ9NRW1 208 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 SRP72O76094 671 aaKnown RBP20.88■□□□□ 0.93
CTNND2-201ENST00000304623 SMAD1Q15797 465 aaKnown RBP20.88■□□□□ 0.93
CTNND2-201ENST00000304623 RIN2Q8WYP3 895 aaPredicted RBP20.88■□□□□ 0.93
CTNND2-201ENST00000304623 ERP44Q9BS26 406 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 THTPAQ9BU02 230 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.88■□□□□ 0.93
CTNND2-201ENST00000304623 TBX3O15119 743 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 HSPA1AP0DMV8 641 aaKnown RBP20.88■□□□□ 0.93
CTNND2-201ENST00000304623 HSPA1BP0DMV9 641 aaKnown RBP20.88■□□□□ 0.93
CTNND2-201ENST00000304623 HMOX2P30519 316 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 NLRP11P59045 1033 aaKnown RBP20.88■□□□□ 0.93
CTNND2-201ENST00000304623 RAD51Q06609 339 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 PTK7Q13308 1070 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 PTGISQ16647 500 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 DALRD3Q5D0E6 543 aaKnown RBP20.88■□□□□ 0.93
CTNND2-201ENST00000304623 OR2W6PQ8NHA6 318 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 TEKT4Q8WW24 435 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 CLMNQ96JQ2 1002 aa20.88■□□□□ 0.93
CTNND2-201ENST00000304623 MYO5CQ9NQX4 1742 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 SUPT3HO75486 399 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 CCDC159P0C7I6 412 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 NSMCE4AQ9NXX6 385 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 MED14O60244 1454 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 NPHP3-ACAD11A0A0J9YXS1 232 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 TBC1D4O60343 1298 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 MAGEA4P43358 317 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 CENPCQ03188 943 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 DMC1Q14565 340 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 TRIP10Q15642 601 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 C12orf60Q5U649 245 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 RMDN1Q96DB5 314 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 TRIM10Q9UDY6 481 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 GPSM2P81274 684 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 TRAPPC11Q7Z392 1133 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 SYN2Q92777 582 aaPredicted RBP20.87■□□□□ 0.93
CTNND2-201ENST00000304623 CELF1Q92879 486 aaKnown RBP20.87■□□□□ 0.93
CTNND2-201ENST00000304623 HPS3Q969F9 1004 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 KLHL11Q9NVR0 708 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 MOSPD1Q9UJG1 213 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 ATP11BQ9Y2G3 1177 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 FAM95CA0A1B0GW59 222 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 FAM196BA6NMK8 535 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 B2RBV5 119 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 NEMP1O14524 444 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 SNRPAP09012 282 aaKnown RBP20.87■□□□□ 0.93
CTNND2-201ENST00000304623 LCP1P13796 627 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 FOXO4P98177 505 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 NKX1-1Q15270 411 aaPredicted RBP20.87■□□□□ 0.93
CTNND2-201ENST00000304623 PLD3Q8IV08 490 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 ELOA2Q8IYF1 753 aaPredicted RBP20.87■□□□□ 0.93
CTNND2-201ENST00000304623 ELMOD1Q8N336 334 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 SLC30A5Q8TAD4 765 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 PAK5Q9P286 719 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 UGGT1Q9NYU2 1555 aa20.87■□□□□ 0.93
CTNND2-201ENST00000304623 S100A5P33763 92 aa20.86■□□□□ 0.93
CTNND2-201ENST00000304623 CARSP49589 748 aaKnown RBP20.86■□□□□ 0.93
CTNND2-201ENST00000304623 CYFIP1Q7L576 1253 aa20.86■□□□□ 0.93
CTNND2-201ENST00000304623 LAMC1P11047 1609 aa20.86■□□□□ 0.93
CTNND2-201ENST00000304623 CORO7P57737 925 aa20.86■□□□□ 0.93
CTNND2-201ENST00000304623 MRPL28Q13084 256 aaKnown RBP20.86■□□□□ 0.93
CTNND2-201ENST00000304623 C3orf20Q8ND61 904 aa20.86■□□□□ 0.93
CTNND2-201ENST00000304623 TMEM117Q9H0C3 514 aa20.86■□□□□ 0.93
CTNND2-201ENST00000304623 SLC40A1Q9NP59 571 aa20.86■□□□□ 0.93
CTNND2-201ENST00000304623 AFF4Q9UHB7 1163 aaKnown RBP20.86■□□□□ 0.93
CTNND2-201ENST00000304623 LRRC36Q1X8D7 754 aa20.86■□□□□ 0.93
CTNND2-201ENST00000304623 PDGFRAP16234 1089 aa20.86■□□□□ 0.93
CTNND2-201ENST00000304623 SPRP35270 261 aaPredicted RBP20.86■□□□□ 0.93
CTNND2-201ENST00000304623 PMS1P54277 932 aaKnown RBP20.86■□□□□ 0.93
CTNND2-201ENST00000304623 LAMB3Q13751 1172 aa20.86■□□□□ 0.93
CTNND2-201ENST00000304623 CYLC2Q14093 348 aaPredicted RBP20.86■□□□□ 0.93
CTNND2-201ENST00000304623 CPA5Q8WXQ8 436 aa20.86■□□□□ 0.93
CTNND2-201ENST00000304623 PRKAG2Q9UGJ0 569 aa20.86■□□□□ 0.93
CTNND2-201ENST00000304623 PDS5AQ29RF7 1337 aaKnown RBP20.86■□□□□ 0.93
CTNND2-201ENST00000304623 KIF1BO60333 1816 aa20.85■□□□□ 0.93
CTNND2-201ENST00000304623 MYL2P10916 166 aa20.85■□□□□ 0.93
CTNND2-201ENST00000304623 SSTR3P32745 418 aaPredicted RBP20.85■□□□□ 0.93
CTNND2-201ENST00000304623 NSL1Q96IY1 281 aa20.85■□□□□ 0.93
CTNND2-201ENST00000304623 PCMTD2Q9NV79 361 aa20.85■□□□□ 0.93
CTNND2-201ENST00000304623 RGL1Q9NZL6 768 aa20.85■□□□□ 0.93
CTNND2-201ENST00000304623 DGAT1O75907 488 aa20.85■□□□□ 0.93
CTNND2-201ENST00000304623 GYPCP04921 128 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms