RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 KLHDC9Q8NEP7 349 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 EPS8L1Q8TE68 723 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 DHX38Q92620 1227 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 BEGAINQ9BUH8 593 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 DDX20Q9UHI6 824 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 SCN10AQ9Y5Y9 1956 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 MROH7Q68CQ1 1323 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 ANO9A1A5B4 782 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 MOCS3O95396 460 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 SGPL1O95470 568 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 MYCNP04198 464 aaPredicted RBP16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 CYP11B1P15538 503 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 HOXA11P31270 313 aaPredicted RBP16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 IFI16Q16666 785 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 FAM47CQ5HY64 1035 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 SPOPLQ6IQ16 392 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 RNF180Q86T96 592 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 NT5DC4Q86YG4 428 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 RPUSD2Q8IZ73 545 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 PACSIN1Q9BY11 444 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 MRFAP1Q9Y605 127 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 ANK1P16157 1881 aa16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 NPTXRO95502 500 aa16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 CST3P01034 146 aaPredicted RBP16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 PRMT2P55345 433 aa16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 SMYD5Q6GMV2 418 aa16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 NOP9Q86U38 636 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 SLC47A2Q86VL8 602 aa16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 SESTD1Q86VW0 696 aa16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 OLIG1Q8TAK6 271 aa16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 SLC20A1Q8WUM9 679 aa16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 TAF4BQ92750 862 aa16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 ELMO3Q96BJ8 720 aa16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 ARID3AQ99856 593 aa16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 CELF4Q9BZC1 486 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 TRIM6Q9C030 488 aaPredicted RBP16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 APOBEC3GQ9HC16 384 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 NOCTQ9UK39 431 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 JRKLQ9Y4A0 524 aa16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 NUB1Q9Y5A7 615 aa16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 TRIP12Q14669 1992 aaPredicted RBP16.87■□□□□ 0.29
HERPUD1-201ENST00000300302 NFICP08651 508 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 MYL6P60660 151 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 TMEM132DQ14C87 1099 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 ZNF699Q32M78 642 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 SLC10A6Q3KNW5 377 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 JADE1Q6IE81 842 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 GDF6Q6KF10 455 aaPredicted RBP16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 SLAIN1Q8ND83 568 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 PLEKHA5Q9HAU0 1116 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 C2CD2Q9Y426 696 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 PCDHB2Q9Y5E7 798 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 CAPN6Q9Y6Q1 641 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 A0A0A6YYK5 440 aaPredicted RBP16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 CABYRO75952 493 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 YARSP54577 528 aaKnown RBP16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 MRPS6P82932 125 aaKnown RBP16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 CDR2Q01850 454 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 CCSAPQ6IQ19 270 aaPredicted RBP16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 ZNF677Q86XU0 584 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 MNS1Q8NEH6 495 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 TMEM40Q8WWA1 233 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 NIF3L1Q9GZT8 377 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 SALL4Q9UJQ4 1053 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 CDC23Q9UJX2 597 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 PIN4Q9Y237 131 aaKnown RBP16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 TRIM17Q9Y577 477 aa16.86■□□□□ 0.29
HERPUD1-201ENST00000300302 TMCO5BA8MYB1 307 aa16.85■□□□□ 0.29
HERPUD1-201ENST00000300302 CTIFO43310 598 aaKnown RBP16.85■□□□□ 0.29
HERPUD1-201ENST00000300302 BUB1O43683 1085 aa16.85■□□□□ 0.29
HERPUD1-201ENST00000300302 KRT19P08727 400 aa16.85■□□□□ 0.29
HERPUD1-201ENST00000300302 TMEM253P0C7T8 217 aa16.85■□□□□ 0.29
HERPUD1-201ENST00000300302 GZMAP12544 262 aa16.85■□□□□ 0.29
HERPUD1-201ENST00000300302 GALCP54803 685 aa16.85■□□□□ 0.29
HERPUD1-201ENST00000300302 TAF3Q5VWG9 929 aa16.85■□□□□ 0.29
HERPUD1-201ENST00000300302 SERINC5Q86VE9 423 aa16.85■□□□□ 0.29
HERPUD1-201ENST00000300302 CTNNBL1Q8WYA6 563 aaPredicted RBP16.85■□□□□ 0.29
HERPUD1-201ENST00000300302 FAXDC2Q96IV6 333 aa16.85■□□□□ 0.29
HERPUD1-201ENST00000300302 PCDHB4Q9Y5E5 795 aa16.85■□□□□ 0.29
HERPUD1-201ENST00000300302 TRPV2Q9Y5S1 764 aa16.85■□□□□ 0.29
HERPUD1-201ENST00000300302 ACO1P21399 889 aaKnown RBP16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 YWHAEP62258 255 aaKnown RBP16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 PAPD7Q5XG87 772 aaKnown RBP16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 RPAINQ86UA6 219 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 WBP1LQ9NX94 342 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 CNTN6Q9UQ52 1028 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 DERAQ9Y315 318 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 CENPFP49454 3210 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 ANKRD62A6NC57 917 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 DYNC1I1O14576 645 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 ENC1O14682 589 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 MEFVO15553 781 aaPredicted RBP16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 RTN2O75298 545 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 ATP1A1P05023 1023 aaKnown RBP16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 MMEP08473 750 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 CHRNB2P17787 502 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 ATICP31939 592 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 NOP2P46087 812 aaKnown RBP16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 TMEM270Q6UE05 265 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 C1orf127Q8N9H9 656 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms