RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 SUPT20HQ8NEM7 779 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 FLAD1Q8NFF5 587 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 CCT6BQ92526 530 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 RPS6KC1Q96S38 1066 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 C11orf70Q9BRQ4 267 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 PPP1R12CQ9BZL4 782 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 EBF2Q9HAK2 575 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 PARP2Q9UGN5 583 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 TRIM33Q9UPN9 1127 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 WDR64B1ANS9 1081 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 MUTP22033 750 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 MTERF2Q49AM1 385 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 SEZ6Q53EL9 994 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 ERMARDQ5T6L9 678 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 ANO5Q75V66 913 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 SLC17A8Q8NDX2 589 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 TMEM161BQ8NDZ6 487 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 TLCD1Q96CP7 247 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 IWS1Q96ST2 819 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 PLVAPQ9BX97 442 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 TBC1D22BQ9NU19 505 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 DPPA5A6NC42 116 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 GZMAP12544 262 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 CHKAP35790 457 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 CTCFP49711 727 aaPredicted RBP14.31□□□□□ -0.12
CTDP1-202ENST00000299543 SCNN1BP51168 640 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 HSD17B4P51659 736 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 POLE2P56282 527 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 MTMR2Q13614 643 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 ALCAMQ13740 583 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 PGM5Q15124 567 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 SPDYE2Q495Y8 402 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 SHC3Q92529 594 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 FAM129AQ9BZQ8 928 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 PDGFDQ9GZP0 370 aaPredicted RBP14.31□□□□□ -0.12
CTDP1-202ENST00000299543 CDC42EP4Q9H3Q1 356 aaKnown RBP14.31□□□□□ -0.12
CTDP1-202ENST00000299543 C1orf112Q9NSG2 853 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 PPP1R1BQ9UD71 204 aaPredicted RBP14.31□□□□□ -0.12
CTDP1-202ENST00000299543 GTF3C4Q9UKN8 822 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 PCDHA3Q9Y5H8 950 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 O00370 1275 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 CTNNA2P26232 953 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 PTGER2P43116 358 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 CYP4F22Q6NT55 531 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 HELQQ8TDG4 1101 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 ARHGEF2Q92974 986 aaKnown RBP14.31□□□□□ -0.12
CTDP1-202ENST00000299543 WNK4Q96J92 1243 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 OSBPL1AQ9BXW6 950 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 TMEM8AQ9HCN3 771 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 PCYOX1Q9UHG3 505 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 BHMG1C9JSJ3 638 aaPredicted RBP14.31□□□□□ -0.12
CTDP1-202ENST00000299543 P4HA2O15460 535 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 THAP12O43422 761 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 PCK1P35558 622 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 LAMB3Q13751 1172 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 MYBPC2Q14324 1141 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 SLMAPQ14BN4 828 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 CLUL1Q15846 466 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 ACAD10Q6JQN1 1059 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 C9orf72Q96LT7 481 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 TXLNGYQ9BZA5 131 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 ANKFY1Q9P2R3 1169 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 UBIAD1Q9Y5Z9 338 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 CNTNAP1P78357 1384 aa14.31□□□□□ -0.12
CTDP1-202ENST00000299543 PI4K2BG5E9Z4 385 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 CD58P19256 250 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 NSFP46459 744 aaKnown RBP14.3□□□□□ -0.12
CTDP1-202ENST00000299543 LIG4P49917 911 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 WDR44Q5JSH3 913 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 SLC30A9Q6PML9 568 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 TAB3Q8N5C8 712 aaPredicted RBP14.3□□□□□ -0.12
CTDP1-202ENST00000299543 TSC22D3Q99576 134 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 EPAS1Q99814 870 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 RIPK3Q9Y572 518 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 ANKRD31Q8N7Z5 1873 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 THSD7AQ9UPZ6 1657 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 SIPA1L1O43166 1804 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 SLX4Q8IY92 1834 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 NUDT17P0C025 328 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 MXRA7P84157 204 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 PCNX4Q63HM2 1172 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 B4GALNT2Q8NHY0 566 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 ATG4CQ96DT6 458 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 PDCD2LQ9BRP1 358 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 ABCF3Q9NUQ8 709 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 WNT10BO00744 389 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 RARGP13631 454 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 ITGA8P53708 1063 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 RNASELQ05823 741 aaKnown RBP14.3□□□□□ -0.12
CTDP1-202ENST00000299543 AUHQ13825 339 aaKnown RBP14.3□□□□□ -0.12
CTDP1-202ENST00000299543 ZNF394Q53GI3 561 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 TMEM270Q6UE05 265 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 ZNF365Q70YC5 407 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 C7orf43Q8WVR3 580 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 TMEM143Q96AN5 459 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 RPAP3Q9H6T3 665 aaPredicted RBP14.3□□□□□ -0.12
CTDP1-202ENST00000299543 ANAPC5Q9UJX4 755 aa14.3□□□□□ -0.12
CTDP1-202ENST00000299543 R3HDM2Q9Y2K5 976 aaKnown RBP14.3□□□□□ -0.12
CTDP1-202ENST00000299543 GREB1LQ9C091 1923 aaPredicted RBP14.29□□□□□ -0.12
CTDP1-202ENST00000299543 ZBED4O75132 1171 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms