RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 NBNO60934 754 aa26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 ASS1P00966 412 aaKnown RBP26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 KCNE1P15382 129 aa26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 KCNJ6P48051 423 aa26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 RAPGEF1Q13905 1077 aa26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 HGSNATQ68CP4 663 aa26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 IRF2BP2Q7Z5L9 587 aa26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 RTN4RL1Q86UN2 441 aaPredicted RBP26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 KREMEN1Q96MU8 473 aa26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 ADAM2Q99965 735 aa26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 APOL6Q9BWW8 343 aa26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 IFIH1Q9BYX4 1025 aaKnown RBP26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 APOBEC3GQ9HC16 384 aaKnown RBP26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 SOWAHDA6NJG2 315 aa26.53■■□□□ 1.84
GTF2A1-201ENST00000298173 F8VZ95 297 aa26.53■■□□□ 1.84
GTF2A1-201ENST00000298173 RAB27AP51159 221 aa26.53■■□□□ 1.84
GTF2A1-201ENST00000298173 GCNT1Q02742 428 aa26.53■■□□□ 1.84
GTF2A1-201ENST00000298173 WDR44Q5JSH3 913 aa26.53■■□□□ 1.84
GTF2A1-201ENST00000298173 FAM43BQ6ZT52 329 aaPredicted RBP26.53■■□□□ 1.84
GTF2A1-201ENST00000298173 KAT5Q92993 513 aa26.53■■□□□ 1.84
GTF2A1-201ENST00000298173 ELMO3Q96BJ8 720 aa26.53■■□□□ 1.84
GTF2A1-201ENST00000298173 KIF12Q96FN5 646 aa26.53■■□□□ 1.84
GTF2A1-201ENST00000298173 XYLT2Q9H1B5 865 aa26.53■■□□□ 1.84
GTF2A1-201ENST00000298173 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.53■■□□□ 1.847e-7■■■■■ 94.1
GTF2A1-201ENST00000298173 PARP2Q9UGN5 583 aa26.53■■□□□ 1.84
GTF2A1-201ENST00000298173 UMODL1Q5DID0 1318 aa26.52■■□□□ 1.84
GTF2A1-201ENST00000298173 SMIM28A0A1B0GU29 152 aa26.52■■□□□ 1.84
GTF2A1-201ENST00000298173 MYL6P60660 151 aa26.52■■□□□ 1.84
GTF2A1-201ENST00000298173 SGSM1Q2NKQ1 1148 aa26.52■■□□□ 1.84
GTF2A1-201ENST00000298173 RAD9BQ6WBX8 426 aa26.52■■□□□ 1.84
GTF2A1-201ENST00000298173 PPM1KQ8N3J5 372 aa26.52■■□□□ 1.84
GTF2A1-201ENST00000298173 FAM81BQ96LP2 452 aa26.52■■□□□ 1.84
GTF2A1-201ENST00000298173 RGS18Q9NS28 235 aa26.52■■□□□ 1.84
GTF2A1-201ENST00000298173 KLK14Q9P0G3 267 aa26.52■■□□□ 1.84
GTF2A1-201ENST00000298173 ARHGAP20Q9P2F6 1191 aa26.52■■□□□ 1.84
GTF2A1-201ENST00000298173 TBX21Q9UL17 535 aa26.52■■□□□ 1.84
GTF2A1-201ENST00000298173 FOXN3O00409 490 aaPredicted RBP26.51■■□□□ 1.83
GTF2A1-201ENST00000298173 STAT1P42224 750 aa26.51■■□□□ 1.83
GTF2A1-201ENST00000298173 PLEKHG4Q58EX7 1191 aa26.51■■□□□ 1.83
GTF2A1-201ENST00000298173 SPOPLQ6IQ16 392 aa26.51■■□□□ 1.83
GTF2A1-201ENST00000298173 HIPK3Q9H422 1215 aa26.51■■□□□ 1.83
GTF2A1-201ENST00000298173 DPP3Q9NY33 737 aa26.51■■□□□ 1.83
GTF2A1-201ENST00000298173 TANC1Q9C0D5 1861 aa26.51■■□□□ 1.83
GTF2A1-201ENST00000298173 MEIS3P2A8K0S8 358 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 ITGA4P13612 1032 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 ATF7P17544 494 aaPredicted RBP26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 SOX5P35711 763 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 MFAP3P55082 362 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 TRPC3Q13507 836 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 ARHGAP44Q17R89 818 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 AGMOQ6ZNB7 445 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 ENOSF1Q7L5Y1 443 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 NECAB2Q7Z6G3 386 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 TMEM130Q8N3G9 435 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 GSTCDQ8NEC7 633 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 ITGA11Q9UKX5 1188 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 NUB1Q9Y5A7 615 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 TET1Q8NFU7 2136 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 ESPNB1AK53 854 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 PRKCIP41743 596 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 NOP14P78316 857 aaKnown RBP26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 FAM189BP81408 668 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 MTF1Q14872 753 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 LRRC26Q2I0M4 334 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 HACE1Q8IYU2 909 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 SHC3Q92529 594 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 TAF4BQ92750 862 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 FTHL17Q9BXU8 183 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 C1orf112Q9NSG2 853 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 GIT1Q9Y2X7 761 aa26.5■■□□□ 1.83
GTF2A1-201ENST00000298173 C9IYK1 514 aa26.49■■□□□ 1.83
GTF2A1-201ENST00000298173 PARNO95453 639 aaKnown RBP26.49■■□□□ 1.83
GTF2A1-201ENST00000298173 ITGB3P05106 788 aa26.49■■□□□ 1.83
GTF2A1-201ENST00000298173 SERPING1P05155 500 aa26.49■■□□□ 1.83
GTF2A1-201ENST00000298173 SKIP12755 728 aa26.49■■□□□ 1.83
GTF2A1-201ENST00000298173 ZNF598Q86UK7 904 aaKnown RBP26.49■■□□□ 1.83
GTF2A1-201ENST00000298173 LINC01599Q8WXQ3 324 aa26.49■■□□□ 1.83
GTF2A1-201ENST00000298173 JAKMIP2Q96AA8 810 aa26.49■■□□□ 1.83
GTF2A1-201ENST00000298173 WNT8AQ9H1J5 351 aa26.49■■□□□ 1.83
GTF2A1-201ENST00000298173 VRTNQ9H8Y1 702 aa26.49■■□□□ 1.83
GTF2A1-201ENST00000298173 NHEJ1Q9H9Q4 299 aaPredicted RBP26.49■■□□□ 1.83
GTF2A1-201ENST00000298173 UBQLN1Q9UMX0 589 aaKnown RBP26.49■■□□□ 1.83
GTF2A1-201ENST00000298173 ATP11BQ9Y2G3 1177 aa26.49■■□□□ 1.83
GTF2A1-201ENST00000298173 SCN5AQ14524 2016 aa26.49■■□□□ 1.83
GTF2A1-201ENST00000298173 PLEKP08567 350 aaPredicted RBP26.48■■□□□ 1.83
GTF2A1-201ENST00000298173 PNMA6AP0CW24 399 aaPredicted RBP26.48■■□□□ 1.83
GTF2A1-201ENST00000298173 GUCY2FP51841 1108 aa26.48■■□□□ 1.83
GTF2A1-201ENST00000298173 MAPK8IP2Q13387 824 aaPredicted RBP26.48■■□□□ 1.83
GTF2A1-201ENST00000298173 IMPG2Q9BZV3 1241 aa26.48■■□□□ 1.83
GTF2A1-201ENST00000298173 TSPYL2Q9H2G4 693 aaPredicted RBP26.48■■□□□ 1.83
GTF2A1-201ENST00000298173 KCND1Q9NSA2 647 aa26.48■■□□□ 1.83
GTF2A1-201ENST00000298173 PTGESO14684 152 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 STAU1O95793 577 aaKnown RBP26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 CXCL10P02778 98 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 FERP16591 822 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 CYP3A5P20815 502 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 ATICP31939 592 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 RBP5P82980 135 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 ASIC2Q16515 512 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 ASTE1Q2TB18 679 aaPredicted RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms