RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 CDH16O75309 829 aa15.77■□□□□ 0.11
SPIDR-201ENST00000297423 STK10O94804 968 aaKnown RBP15.77■□□□□ 0.11
SPIDR-201ENST00000297423 TMEM253P0C7T8 217 aa15.77■□□□□ 0.11
SPIDR-201ENST00000297423 TAL1P17542 331 aaPredicted RBP15.77■□□□□ 0.11
SPIDR-201ENST00000297423 MAPK4P31152 587 aa15.77■□□□□ 0.11
SPIDR-201ENST00000297423 EPHB1P54762 984 aa15.77■□□□□ 0.11
SPIDR-201ENST00000297423 FAM182AQ5T1J6 154 aa15.77■□□□□ 0.11
SPIDR-201ENST00000297423 SLC5A5Q92911 643 aa15.77■□□□□ 0.11
SPIDR-201ENST00000297423 MAGEB18Q96M61 343 aa15.77■□□□□ 0.11
SPIDR-201ENST00000297423 INTS2Q9H0H0 1204 aaKnown RBP15.77■□□□□ 0.11
SPIDR-201ENST00000297423 COG5Q9UP83 839 aa15.77■□□□□ 0.11
SPIDR-201ENST00000297423 CHKBQ9Y259 395 aa15.77■□□□□ 0.11
SPIDR-201ENST00000297423 KDM3AQ9Y4C1 1321 aa15.77■□□□□ 0.11
SPIDR-201ENST00000297423 PI4K2BG5E9Z4 385 aa15.77■□□□□ 0.11
SPIDR-201ENST00000297423 RNF8O76064 485 aa15.77■□□□□ 0.11
SPIDR-201ENST00000297423 RBM15Q96T37 977 aaKnown RBP eCLIP15.77■□□□□ 0.11
SPIDR-201ENST00000297423 PPARGC1AQ9UBK2 798 aaKnown RBP15.77■□□□□ 0.11
SPIDR-201ENST00000297423 ANKRD31Q8N7Z5 1873 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 CCDC195A0A1B0GUA6 201 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 O00370 1275 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 ATP5HO75947 161 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 SERPINB6P35237 376 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 MGAT5Q09328 741 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 ODR4Q5SWX8 454 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 CIAPIN1Q6FI81 312 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 TRIM74Q86UV6 250 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 TRIM73Q86UV7 250 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 EIF1ADQ8N9N8 165 aaKnown RBP15.76■□□□□ 0.11
SPIDR-201ENST00000297423 PRMT6Q96LA8 375 aaPredicted RBP15.76■□□□□ 0.11
SPIDR-201ENST00000297423 AGPAT1Q99943 283 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 DDX3YO15523 660 aaKnown RBP15.76■□□□□ 0.11
SPIDR-201ENST00000297423 CYP26A1O43174 497 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 TAC1P20366 129 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 NOP14P78316 857 aaKnown RBP15.76■□□□□ 0.11
SPIDR-201ENST00000297423 MTFR1Q15390 333 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 ASPRV1Q53RT3 343 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 IZUMO2Q6UXV1 221 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 SPATA24Q86W54 205 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 PIP4K2CQ8TBX8 421 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 SERPINB12Q96P63 405 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 ZSWIM1Q9BR11 485 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 THTPAQ9BU02 230 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 EPB41L4BQ9H329 900 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.76■□□□□ 0.11
SPIDR-201ENST00000297423 ZNF711Q9Y462 761 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 MAST2Q6P0Q8 1798 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 USP17L10C9JJH3 530 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 H3BRJ5 948 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 TTC4O95801 387 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 GM2AP17900 193 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 SERPINB3P29508 390 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 HOXA13P31271 388 aaPredicted RBP15.76■□□□□ 0.11
SPIDR-201ENST00000297423 DYNLT1P63172 113 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 C1orf146Q5VVC0 180 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 TRMT10CQ7L0Y3 403 aaKnown RBP15.76■□□□□ 0.11
SPIDR-201ENST00000297423 FRMD5Q7Z6J6 570 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 ZFPM1Q8IX07 1006 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 CTAGE3PQ8IX95 158 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 RHOT2Q8IXI1 618 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 ZBED8Q8IZ13 594 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 GALNT15Q8N3T1 639 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 HIC2Q96JB3 615 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 TCEAL9Q9UHQ7 104 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 GJA3Q9Y6H8 435 aa15.76■□□□□ 0.11
SPIDR-201ENST00000297423 GDF11O95390 407 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 CCNFP41002 786 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 SMAD1Q15797 465 aaKnown RBP15.75■□□□□ 0.11
SPIDR-201ENST00000297423 PKN2Q16513 984 aaKnown RBP15.75■□□□□ 0.11
SPIDR-201ENST00000297423 ABCB5Q2M3G0 1257 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 RASGEF1CQ8N431 466 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 SNF8Q96H20 258 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 RABGAP1Q9Y3P9 1069 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 PCDHA1Q9Y5I3 950 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 YDJCA8MPS7 323 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 TRPA1O75762 1119 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 ARFIP2P53365 341 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 MCL1Q07820 350 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 PPP2R5CQ13362 524 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 MAP7Q14244 749 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 LRRC74BQ6ZQY2 392 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 MIPOL1Q8TD10 442 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 UTP4Q969X6 686 aaKnown RBP15.75■□□□□ 0.11
SPIDR-201ENST00000297423 SPZ1Q9BXG8 430 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 FBXO6Q9NRD1 293 aaPredicted RBP15.75■□□□□ 0.11
SPIDR-201ENST00000297423 CHCHD3Q9NX63 227 aaKnown RBP15.75■□□□□ 0.11
SPIDR-201ENST00000297423 ABCB11O95342 1321 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 HNRNPCP07910 306 aaKnown RBP eCLIP15.75■□□□□ 0.11
SPIDR-201ENST00000297423 FMO5P49326 533 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 DYNC1I2Q13409 638 aaKnown RBP15.75■□□□□ 0.11
SPIDR-201ENST00000297423 GRAMD1BQ3KR37 738 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 BTNL9Q6UXG8 535 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 KAT5Q92993 513 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 NDNQ99608 321 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 ROPN1BQ9BZX4 212 aaPredicted RBP15.75■□□□□ 0.11
SPIDR-201ENST00000297423 ROPN1Q9HAT0 212 aaPredicted RBP15.75■□□□□ 0.11
SPIDR-201ENST00000297423 DDX18Q9NVP1 670 aaKnown RBP15.75■□□□□ 0.11
SPIDR-201ENST00000297423 CNOT7Q9UIV1 285 aaKnown RBP15.75■□□□□ 0.11
SPIDR-201ENST00000297423 WASF2Q9Y6W5 498 aa15.75■□□□□ 0.11
SPIDR-201ENST00000297423 DDTLA6NHG4 134 aaPredicted RBP15.74■□□□□ 0.11
SPIDR-201ENST00000297423 MIF4GDA9UHW6 222 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms