RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 SOX4Q06945 474 aaPredicted RBP13.13□□□□□ -0.31
HMGB2-201ENST00000296503 DLX2Q07687 328 aaPredicted RBP13.13□□□□□ -0.31
HMGB2-201ENST00000296503 PTPN14Q15678 1187 aa13.13□□□□□ -0.31
HMGB2-201ENST00000296503 CLUL1Q15846 466 aa13.13□□□□□ -0.31
HMGB2-201ENST00000296503 UPP1Q16831 310 aa13.13□□□□□ -0.31
HMGB2-201ENST00000296503 FAM171A1Q5VUB5 890 aa13.13□□□□□ -0.31
HMGB2-201ENST00000296503 KANK3Q6NY19 840 aa13.13□□□□□ -0.31
HMGB2-201ENST00000296503 CD302Q8IX05 232 aa13.13□□□□□ -0.31
HMGB2-201ENST00000296503 SYAP1Q96A49 352 aaPredicted RBP13.13□□□□□ -0.31
HMGB2-201ENST00000296503 B3GALT6Q96L58 329 aa13.13□□□□□ -0.31
HMGB2-201ENST00000296503 HERC2P3Q9BVR0 1158 aa13.13□□□□□ -0.31
HMGB2-201ENST00000296503 BRWD1Q9NSI6 2320 aa13.13□□□□□ -0.31
HMGB2-201ENST00000296503 ATG2AQ2TAZ0 1938 aa13.13□□□□□ -0.31
HMGB2-201ENST00000296503 SF3B1O75533 1304 aaKnown RBP eCLIP13.13□□□□□ -0.312e-6■■■■□ 22.5
HMGB2-201ENST00000296503 PODXLO00592 558 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 XPOTO43592 962 aaKnown RBP13.12□□□□□ -0.31
HMGB2-201ENST00000296503 FAM189A1O60320 539 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 CLASP2O75122 1294 aaKnown RBP13.12□□□□□ -0.31
HMGB2-201ENST00000296503 SRGAP2BP0DMP2 458 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 GARTP22102 1010 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 RPL9P32969 192 aaKnown RBP13.12□□□□□ -0.31
HMGB2-201ENST00000296503 EHHADHQ08426 723 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 ELAVL2Q12926 359 aaKnown RBP13.12□□□□□ -0.31
HMGB2-201ENST00000296503 PSMD2Q13200 908 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 COL19A1Q14993 1142 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 LEXMQ3ZCV2 418 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 KMT5BQ4FZB7 885 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 ARMCX5Q6P1M9 558 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 NELFCDQ8IXH7 590 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 GPT2Q8TD30 523 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 SAAL1Q96ER3 474 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 KLHL5Q96PQ7 755 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 FAM213AQ9BRX8 229 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 REV3LO60673 3130 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 GOLGA8IPA6NC78 632 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 GOLGA8JA6NMD2 632 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 TRAPPC3O43617 180 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 KLRC4O43908 158 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 RPN1P04843 607 aaKnown RBP13.12□□□□□ -0.31
HMGB2-201ENST00000296503 DSG1Q02413 1049 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 KIAA0319Q5VV43 1072 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 EPM2AIP1Q7L775 607 aaPredicted RBP13.12□□□□□ -0.31
HMGB2-201ENST00000296503 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.12□□□□□ -0.31
HMGB2-201ENST00000296503 RIN2Q8WYP3 895 aaPredicted RBP13.12□□□□□ -0.31
HMGB2-201ENST00000296503 TSPAN18Q96SJ8 248 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 CBWD1Q9BRT8 395 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 CHST7Q9NS84 486 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 BARX2Q9UMQ3 279 aaPredicted RBP13.12□□□□□ -0.31
HMGB2-201ENST00000296503 UBQLN1Q9UMX0 589 aaKnown RBP13.12□□□□□ -0.31
HMGB2-201ENST00000296503 NUB1Q9Y5A7 615 aa13.12□□□□□ -0.31
HMGB2-201ENST00000296503 LILRB3O75022 631 aa13.11□□□□□ -0.31
HMGB2-201ENST00000296503 TBX10O75333 385 aa13.11□□□□□ -0.31
HMGB2-201ENST00000296503 EFEMP2O95967 443 aa13.11□□□□□ -0.31
HMGB2-201ENST00000296503 ADRB2P07550 413 aa13.11□□□□□ -0.31
HMGB2-201ENST00000296503 CNPP09543 421 aaKnown RBP13.11□□□□□ -0.31
HMGB2-201ENST00000296503 PRR29P0C7W0 189 aa13.11□□□□□ -0.31
HMGB2-201ENST00000296503 IGFBP6P24592 240 aaPredicted RBP13.11□□□□□ -0.31
HMGB2-201ENST00000296503 HOXD13P35453 343 aa13.11□□□□□ -0.31
HMGB2-201ENST00000296503 STK4Q13043 487 aa13.11□□□□□ -0.31
HMGB2-201ENST00000296503 JADE1Q6IE81 842 aa13.11□□□□□ -0.31
HMGB2-201ENST00000296503 PTCRAQ6ISU1 281 aaPredicted RBP13.11□□□□□ -0.31
HMGB2-201ENST00000296503 CRELD2Q6UXH1 353 aaPredicted RBP13.11□□□□□ -0.31
HMGB2-201ENST00000296503 PPFIBP1Q86W92 1011 aa13.11□□□□□ -0.31
HMGB2-201ENST00000296503 RNF168Q8IYW5 571 aaPredicted RBP13.11□□□□□ -0.31
HMGB2-201ENST00000296503 FMR1NBQ8N0W7 255 aaPredicted RBP13.11□□□□□ -0.31
HMGB2-201ENST00000296503 ZSWIM2Q8NEG5 633 aa13.11□□□□□ -0.31
HMGB2-201ENST00000296503 SCFD1Q8WVM8 642 aa13.11□□□□□ -0.31
HMGB2-201ENST00000296503 TTPALQ9BTX7 342 aa13.11□□□□□ -0.31
HMGB2-201ENST00000296503 ASB7Q9H672 318 aa13.11□□□□□ -0.31
HMGB2-201ENST00000296503 CLEC1BQ9P126 229 aa13.11□□□□□ -0.31
HMGB2-201ENST00000296503 TUBGCP4Q9UGJ1 667 aa13.11□□□□□ -0.31
HMGB2-201ENST00000296503 CD207Q9UJ71 328 aa13.11□□□□□ -0.31
HMGB2-201ENST00000296503 TMEM189-UBE2V1I3L0A0 370 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 CLIC2O15247 247 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 GLP2RO95838 553 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 BMP1P13497 986 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 CYP3A5P20815 502 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 BRCC3P46736 316 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 FAM160A1Q05DH4 1040 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 TMEM132DQ14C87 1099 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 ZBTB6Q15916 424 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 PUS10Q3MIT2 529 aaKnown RBP13.1□□□□□ -0.31
HMGB2-201ENST00000296503 HS2ST1Q7LGA3 356 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 GLYCTKQ8IVS8 523 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 GPD1LQ8N335 351 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 BEST2Q8NFU1 509 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 VN1R2Q8NFZ6 395 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 CASP10Q92851 521 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.1□□□□□ -0.31
HMGB2-201ENST00000296503 HCFC2Q9Y5Z7 792 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 UBE4BO95155 1302 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 SPDYE4A6NLX3 237 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 I3L4J1 428 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 KIAA0391O15091 583 aaKnown RBP13.1□□□□□ -0.31
HMGB2-201ENST00000296503 EXTL3O43909 919 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 IL18RAPO95256 599 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 ADH1AP07327 375 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 GUCY2FP51841 1108 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 POU5F1Q01860 360 aaKnown RBP13.1□□□□□ -0.31
HMGB2-201ENST00000296503 DPYDQ12882 1025 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms