RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 MMEP08473 750 aa14.09□□□□□ -0.15
PPP1CB-201ENST00000296122 MYL6P60660 151 aa14.09□□□□□ -0.15
PPP1CB-201ENST00000296122 NFX1Q12986 1120 aaKnown RBP14.09□□□□□ -0.15
PPP1CB-201ENST00000296122 SEL1L2Q5TEA6 688 aa14.09□□□□□ -0.15
PPP1CB-201ENST00000296122 DNAAF5Q86Y56 855 aa14.09□□□□□ -0.15
PPP1CB-201ENST00000296122 CEP120Q8N960 986 aa14.09□□□□□ -0.15
PPP1CB-201ENST00000296122 LNX1Q8TBB1 728 aaPredicted RBP14.09□□□□□ -0.15
PPP1CB-201ENST00000296122 RAET1EQ8TD07 263 aa14.09□□□□□ -0.15
PPP1CB-201ENST00000296122 NFKBIZQ9BYH8 718 aa14.09□□□□□ -0.15
PPP1CB-201ENST00000296122 CPSF3Q9UKF6 684 aaKnown RBP14.09□□□□□ -0.15
PPP1CB-201ENST00000296122 PACSIN2Q9UNF0 486 aaPredicted RBP14.09□□□□□ -0.15
PPP1CB-201ENST00000296122 ZBTB42B2RXF5 422 aa14.08□□□□□ -0.15
PPP1CB-201ENST00000296122 NPTXRO95502 500 aa14.08□□□□□ -0.15
PPP1CB-201ENST00000296122 DESP17661 470 aa14.08□□□□□ -0.15
PPP1CB-201ENST00000296122 ARF4P18085 180 aaPredicted RBP14.08□□□□□ -0.15
PPP1CB-201ENST00000296122 TWF2Q6IBS0 349 aaKnown RBP14.08□□□□□ -0.15
PPP1CB-201ENST00000296122 MTG1Q9BT17 334 aaPredicted RBP14.08□□□□□ -0.15
PPP1CB-201ENST00000296122 THAP2Q9H0W7 228 aa14.08□□□□□ -0.15
PPP1CB-201ENST00000296122 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.08□□□□□ -0.15
PPP1CB-201ENST00000296122 MYO1FO00160 1098 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 MED7O43513 233 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 PRLRP16471 622 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 SP3Q02447 781 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 NAA35Q5VZE5 725 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 NOP9Q86U38 636 aaKnown RBP14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 CD302Q8IX05 232 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 ZNF710Q8N1W2 664 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 BEST2Q8NFU1 509 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 TPCN2Q8NHX9 752 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 CNTNAP2Q9UHC6 1331 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 SMIM35A0A1B0GVV1 85 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 ZNF185O15231 689 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 DUSP11O75319 330 aaKnown RBP14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 FGFR4P22455 802 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 RBP5P82980 135 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 CLUL1Q15846 466 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 DCUN1D2Q6PH85 259 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 PASD1Q8IV76 773 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 KIAA0319LQ8IZA0 1049 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 PPP1R13LQ8WUF5 828 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 CCDC113Q9H0I3 377 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 MRPL47Q9HD33 250 aaKnown RBP14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 ADAM22Q9P0K1 906 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 AGAP1Q9UPQ3 857 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 Q9Y3F1 56 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 MCM3APO60318 1980 aa14.08□□□□□ -0.16
PPP1CB-201ENST00000296122 BTNL10A8MVZ5 291 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 KIF4AO95239 1232 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 F2P00734 622 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 POLR2BP30876 1174 aaKnown RBP14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 BRD3Q15059 726 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 TAF2Q6P1X5 1199 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 CRELD2Q6UXH1 353 aaPredicted RBP14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 TMEM35BQ8NCS4 154 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 MINDY3Q9H8M7 445 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 PCDHGC5Q9Y5F6 944 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 ITGB3P05106 788 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 SLC27A1Q6PCB7 646 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 SLC30A5Q8TAD4 765 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 ZNF564Q8TBZ8 553 aaPredicted RBP14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 ZNF516Q92618 1163 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 NUP85Q9BW27 656 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 PARD6BQ9BYG5 372 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 DOCK5Q9H7D0 1870 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 GRID2IPA4D2P6 1211 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 EIF4BP23588 611 aaKnown RBP14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 C2orf54Q08AI8 447 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 PCBP1Q15365 356 aaKnown RBP eCLIP14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 HSP90B2PQ58FF3 399 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 REM2Q8IYK8 340 aaPredicted RBP14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 KCNN1Q92952 543 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 CAPNS2Q96L46 248 aa14.07□□□□□ -0.16
PPP1CB-201ENST00000296122 LACTBL1A8MY62 500 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 PGRMC1O00264 195 aaKnown RBP14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 RRP9O43818 475 aaKnown RBP14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 B4GALT4O60513 344 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 WEE2P0C1S8 567 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 ZNF865P0CJ78 1059 aaPredicted RBP14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 MYBL1P10243 752 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 FAM187BQ17R55 369 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 ACAD10Q6JQN1 1059 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 SESTD1Q86VW0 696 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 ANKRD7Q92527 254 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 C11orf70Q9BRQ4 267 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 KATNBL1Q9H079 304 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 UVRAGQ9P2Y5 699 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 GTF3C4Q9UKN8 822 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 TTLL13PA6NNM8 815 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 MIF4GDA9UHW6 222 aaKnown RBP14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 GPR25O00155 361 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 TOMM70O94826 608 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 ZSCAN20P17040 1043 aaPredicted RBP14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 FBXO38Q6PIJ6 1188 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 TTC39CQ8N584 583 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 LRRN4CLQ8ND94 238 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 RPS6KC1Q96S38 1066 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 IFT122Q9HBG6 1241 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 ACP6Q9NPH0 428 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 XPNPEP3Q9NQH7 507 aa14.06□□□□□ -0.16
PPP1CB-201ENST00000296122 A0A0G2JMZ2 1700 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms