RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 DCLK3Q9C098 648 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 KIAA1586Q9HCI6 787 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 LRRC4BQ9NT99 713 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 LGALS13Q9UHV8 139 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 ASB3Q9Y575 518 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 SHANK3Q9BYB0 1731 aa10.9□□□□□ -0.67
LMX1A-201ENST00000294816 A0A1W2PPM1 405 aa10.9□□□□□ -0.67
LMX1A-201ENST00000294816 MSH4O15457 936 aa10.9□□□□□ -0.67
LMX1A-201ENST00000294816 RALAP11233 206 aa10.9□□□□□ -0.67
LMX1A-201ENST00000294816 BMP3P12645 472 aa10.9□□□□□ -0.67
LMX1A-201ENST00000294816 ACSBG2Q5FVE4 666 aa10.9□□□□□ -0.67
LMX1A-201ENST00000294816 LLGL2Q6P1M3 1020 aa10.9□□□□□ -0.67
LMX1A-201ENST00000294816 ATL2Q8NHH9 583 aa10.9□□□□□ -0.67
LMX1A-201ENST00000294816 EPS8L1Q8TE68 723 aa10.9□□□□□ -0.67
LMX1A-201ENST00000294816 NRG4Q8WWG1 115 aa10.9□□□□□ -0.67
LMX1A-201ENST00000294816 CD101Q93033 1021 aa10.9□□□□□ -0.67
LMX1A-201ENST00000294816 CCDC127Q96BQ5 260 aa10.9□□□□□ -0.67
LMX1A-201ENST00000294816 CFAP57Q96MR6 1250 aa10.9□□□□□ -0.67
LMX1A-201ENST00000294816 ARL8BQ9NVJ2 186 aa10.9□□□□□ -0.67
LMX1A-201ENST00000294816 KLHL11Q9NVR0 708 aa10.9□□□□□ -0.67
LMX1A-201ENST00000294816 HEY2Q9UBP5 337 aa10.9□□□□□ -0.67
LMX1A-201ENST00000294816 ITGB4P16144 1822 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 GOLGA8SH3BPF8 625 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 GOLGA8MH3BSY2 632 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 K7ENM7 598 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 FSCN2O14926 492 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 ZBED4O75132 1171 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 HADHBP55084 474 aaKnown RBP10.89□□□□□ -0.67
LMX1A-201ENST00000294816 CAV1Q03135 178 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 PPP3CAQ08209 521 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 THOC5Q13769 683 aaKnown RBP10.89□□□□□ -0.67
LMX1A-201ENST00000294816 RASA3Q14644 834 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 CERKLQ49MI3 558 aaPredicted RBP10.89□□□□□ -0.67
LMX1A-201ENST00000294816 GPATCH4Q5T3I0 446 aaKnown RBP10.89□□□□□ -0.67
LMX1A-201ENST00000294816 OR52E8Q6IFG1 317 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 MTHFD1LQ6UB35 978 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 C12orf50Q8NA57 414 aaPredicted RBP10.89□□□□□ -0.67
LMX1A-201ENST00000294816 RFWD2Q8NHY2 731 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 MORC4Q8TE76 937 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 MKNK1Q9BUB5 465 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 OLFML3Q9NRN5 406 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 SMAPO00193 183 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 CCDC22O60826 627 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 IVDP26440 423 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 VAMP7P51809 220 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 FASTKD3Q14CZ7 662 aaKnown RBP10.89□□□□□ -0.67
LMX1A-201ENST00000294816 PDK4Q16654 411 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 ZNF568Q3ZCX4 644 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 PCNX4Q63HM2 1172 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 CLNKQ7Z7G1 428 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 ANKMY2Q8IV38 441 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 MAIP1Q8WWC4 291 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 ZNF75CPQ92670 426 aaPredicted RBP10.89□□□□□ -0.67
LMX1A-201ENST00000294816 P2RX7Q99572 595 aaKnown RBP10.89□□□□□ -0.67
LMX1A-201ENST00000294816 PCMTD2Q9NV79 361 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 WASF2Q9Y6W5 498 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 SCN7AQ01118 1682 aa10.89□□□□□ -0.67
LMX1A-201ENST00000294816 EIF3DO15371 548 aaKnown RBP eCLIP10.88□□□□□ -0.67
LMX1A-201ENST00000294816 TBX10O75333 385 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 UFL1O94874 794 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 ESRRAP11474 423 aaPredicted RBP10.88□□□□□ -0.67
LMX1A-201ENST00000294816 SLC34A1Q06495 639 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 MDH1BQ5I0G3 518 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 FOXB2Q5VYV0 432 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 CCDC62Q6P9F0 684 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 CCDC89Q8N998 374 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 MAML1Q92585 1016 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 FBXO6Q9NRD1 293 aaPredicted RBP10.88□□□□□ -0.67
LMX1A-201ENST00000294816 PKD2L1Q9P0L9 805 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 MAGEA13PA6NCF6 341 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 C2orf71A6NGG8 1288 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 SORBS3O60504 671 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 TJP3O95049 919 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 PSMG1O95456 288 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 IFNB1P01574 187 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 ZSCAN5DPP0CG00 497 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 ETS2P15036 469 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 KRT4P19013 534 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 CD58P19256 250 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 ADRA1DP25100 572 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 MAN1A1P33908 653 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 MXI1P50539 228 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 CLEC4GQ6UXB4 293 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 ZNF720Q7Z2F6 126 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 APLFQ8IW19 511 aaPredicted RBP10.88□□□□□ -0.67
LMX1A-201ENST00000294816 ZBED8Q8IZ13 594 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 PSPC1Q8WXF1 523 aaKnown RBP10.88□□□□□ -0.67
LMX1A-201ENST00000294816 HAUS1Q96CS2 278 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 FAM161BQ96MY7 647 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 TTC1Q99614 292 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 KCNQ5Q9NR82 932 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 ZNF148Q9UQR1 794 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 LTBP4Q8N2S1 1624 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 DDX39AO00148 427 aaKnown RBP10.88□□□□□ -0.67
LMX1A-201ENST00000294816 BANF1O75531 89 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 GSTT1P30711 240 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 SSTR3P32745 418 aaPredicted RBP10.88□□□□□ -0.67
LMX1A-201ENST00000294816 RBM5P52756 815 aaKnown RBP eCLIP10.88□□□□□ -0.67
LMX1A-201ENST00000294816 RHBDL3P58872 404 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 NOP14P78316 857 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms