RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 UMPSP11172 480 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 CDH2P19022 906 aaPredicted RBP13.04□□□□□ -0.32
SLX4-201ENST00000294008 TMEM132BQ14DG7 1078 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 ANO5Q75V66 913 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 NUP85Q9BW27 656 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 STRNO43815 780 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 MMEP08473 750 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 PTPN1P18031 435 aaKnown RBP13.04□□□□□ -0.32
SLX4-201ENST00000294008 ABCE1P61221 599 aaKnown RBP13.04□□□□□ -0.32
SLX4-201ENST00000294008 ARMC4Q5T2S8 1044 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 LRRC74BQ6ZQY2 392 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 CARNMT1Q8N4J0 409 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 PTPRN2Q92932 1015 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 SEC31BQ9NQW1 1179 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 MPP6Q9NZW5 540 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 YEATS2Q9ULM3 1422 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 CLCN6P51797 869 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 CYP4X1Q8N118 509 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 THAP11Q96EK4 314 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 RBM41Q96IZ5 413 aaKnown RBP13.04□□□□□ -0.32
SLX4-201ENST00000294008 RUVBL2Q9Y230 463 aaKnown RBP13.04□□□□□ -0.32
SLX4-201ENST00000294008 DLGAP3O95886 979 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 VCLP18206 1134 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 DSG3P32926 999 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 ALDH7A1P49419 539 aaKnown RBP13.04□□□□□ -0.32
SLX4-201ENST00000294008 JAK3P52333 1124 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 SRSF11Q05519 484 aaKnown RBP13.04□□□□□ -0.32
SLX4-201ENST00000294008 KDSRQ06136 332 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 DSCC1Q9BVC3 393 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 KLHL1Q9NR64 748 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 IMPAD1Q9NX62 359 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 SH3GLB1Q9Y371 365 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 USP19O94966 1318 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 MMP10P09238 476 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 PLCG1P19174 1290 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 RGS2P41220 211 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 PLOD1Q02809 727 aaPredicted RBP13.04□□□□□ -0.32
SLX4-201ENST00000294008 KLC1Q07866 573 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 P3H2Q8IVL5 708 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 NARS2Q96I59 477 aaKnown RBP13.04□□□□□ -0.32
SLX4-201ENST00000294008 MIR1-1HGQ9H1L0 117 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 ABI2Q9NYB9 513 aaPredicted RBP13.04□□□□□ -0.32
SLX4-201ENST00000294008 NFU1Q9UMS0 254 aa13.04□□□□□ -0.32
SLX4-201ENST00000294008 TDRKHQ9Y2W6 561 aaKnown RBP13.04□□□□□ -0.32
SLX4-201ENST00000294008 FAM25AB3EWG3 89 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 FAM25CB3EWG5 89 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 FAM25GB3EWG6 89 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 CFAP99D6REC4 459 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 CPSF4O95639 269 aaKnown RBP13.03□□□□□ -0.32
SLX4-201ENST00000294008 SPP2Q13103 211 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 SNX21Q969T3 373 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 MRPL4Q9BYD3 311 aaKnown RBP13.03□□□□□ -0.32
SLX4-201ENST00000294008 HDHD2Q9H0R4 259 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 ZFYVE28Q9HCC9 887 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 WWOXQ9NZC7 414 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 SLAIN2Q9P270 581 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 TRPC4Q9UBN4 977 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 PNMA6EA0A0J9YXQ4 647 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 ZNF24P17028 368 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 COX10Q12887 443 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.03□□□□□ -0.32
SLX4-201ENST00000294008 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.03□□□□□ -0.32
SLX4-201ENST00000294008 LOC102724428A0A0B4J2F2 783 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 TMEM191CA6NGB0 347 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 SOWAHDA6NJG2 315 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 HAUS5O94927 633 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 SIK1P57059 783 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 CYP4A22Q5TCH4 519 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 SRP68Q9UHB9 627 aaKnown RBP13.03□□□□□ -0.32
SLX4-201ENST00000294008 PLAAQ9Y263 795 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 PRODHO43272 600 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 FGAP02671 866 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 CCSAPQ6IQ19 270 aaPredicted RBP13.03□□□□□ -0.32
SLX4-201ENST00000294008 MTSS1LQ765P7 747 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 IPMKQ8NFU5 416 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 FAR2Q96K12 515 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 CIPCQ9C0C6 399 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 C20orf96Q9NUD7 363 aaPredicted RBP13.03□□□□□ -0.32
SLX4-201ENST00000294008 GRIN2BQ13224 1484 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 EIF4G3O43432 1585 aaKnown RBP13.03□□□□□ -0.32
SLX4-201ENST00000294008 SNTNA6NMZ2 147 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 CLASP2O75122 1294 aaKnown RBP13.03□□□□□ -0.32
SLX4-201ENST00000294008 MAPKAPK2P49137 400 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 TRIM65Q6PJ69 517 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 WDR36Q8NI36 951 aaKnown RBP13.03□□□□□ -0.32
SLX4-201ENST00000294008 KAT2BQ92831 832 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 SH3GL1Q99961 368 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 STK33Q9BYT3 514 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 PRKD2Q9BZL6 878 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 EHD2Q9NZN4 543 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 PTPN7P35236 360 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 USP10Q14694 798 aaKnown RBP13.03□□□□□ -0.32
SLX4-201ENST00000294008 RARS2Q5T160 578 aaKnown RBP13.03□□□□□ -0.32
SLX4-201ENST00000294008 SRLQ86TD4 932 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 ZBTB38Q8NAP3 1195 aaPredicted RBP13.03□□□□□ -0.32
SLX4-201ENST00000294008 RHBGQ9H310 441 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 LIMA1Q9UHB6 759 aaKnown RBP13.03□□□□□ -0.32
SLX4-201ENST00000294008 PCDHA6Q9UN73 950 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 PCDHA8Q9Y5H6 950 aa13.03□□□□□ -0.32
SLX4-201ENST00000294008 RPS6KA5O75582 802 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms