RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 CYFIP2Q96F07 1278 aa21.35■■□□□ 1.01
CXCL16-201ENST00000293778 PLVAPQ9BX97 442 aa21.35■■□□□ 1.01
CXCL16-201ENST00000293778 TXLNGYQ9BZA5 131 aa21.35■■□□□ 1.01
CXCL16-201ENST00000293778 ATP8A1Q9Y2Q0 1164 aa21.35■■□□□ 1.01
CXCL16-201ENST00000293778 MYO1FO00160 1098 aa21.35■■□□□ 1.01
CXCL16-201ENST00000293778 CNMDO75829 334 aa21.35■■□□□ 1.01
CXCL16-201ENST00000293778 RARAP10276 462 aa21.35■■□□□ 1.01
CXCL16-201ENST00000293778 TBXAS1P24557 533 aaPredicted RBP21.35■■□□□ 1.01
CXCL16-201ENST00000293778 EFNA5P52803 228 aa21.35■■□□□ 1.01
CXCL16-201ENST00000293778 PLTPP55058 493 aa21.35■■□□□ 1.01
CXCL16-201ENST00000293778 NOP14P78316 857 aaKnown RBP21.35■■□□□ 1.01
CXCL16-201ENST00000293778 SPDYCQ5MJ68 293 aa21.35■■□□□ 1.01
CXCL16-201ENST00000293778 RUNDC3BQ96NL0 473 aa21.35■■□□□ 1.01
CXCL16-201ENST00000293778 MPHOSPH6Q99547 160 aaKnown RBP21.35■■□□□ 1.01
CXCL16-201ENST00000293778 R3HDMLQ9H3Y0 253 aa21.35■■□□□ 1.01
CXCL16-201ENST00000293778 PPME1Q9Y570 386 aa21.35■■□□□ 1.01
CXCL16-201ENST00000293778 GBP1P32455 592 aa21.34■■□□□ 1.01
CXCL16-201ENST00000293778 COILP38432 576 aaPredicted RBP21.34■■□□□ 1.01
CXCL16-201ENST00000293778 SIX1Q15475 284 aaPredicted RBP21.34■■□□□ 1.01
CXCL16-201ENST00000293778 ZDHHC24Q6UX98 284 aa21.34■■□□□ 1.01
CXCL16-201ENST00000293778 TRIM72Q6ZMU5 477 aa21.34■■□□□ 1.01
CXCL16-201ENST00000293778 MON1BQ7L1V2 547 aa21.34■■□□□ 1.01
CXCL16-201ENST00000293778 PHLDB2Q86SQ0 1253 aa21.34■■□□□ 1.01
CXCL16-201ENST00000293778 TRIM7Q9C029 511 aa21.34■■□□□ 1.01
CXCL16-201ENST00000293778 NUB1Q9Y5A7 615 aa21.34■■□□□ 1.01
CXCL16-201ENST00000293778 LRRC37A2A6NM11 1700 aa21.34■■□□□ 1.01
CXCL16-201ENST00000293778 TTLL13PA6NNM8 815 aa21.33■■□□□ 1.01
CXCL16-201ENST00000293778 PGK2P07205 417 aa21.33■■□□□ 1.01
CXCL16-201ENST00000293778 MARK3P27448 753 aa21.33■■□□□ 1.01
CXCL16-201ENST00000293778 GNA15P30679 374 aa21.33■■□□□ 1.01
CXCL16-201ENST00000293778 NCOA4Q13772 614 aa21.33■■□□□ 1.01
CXCL16-201ENST00000293778 IER5Q5VY09 327 aa21.33■■□□□ 1.01
CXCL16-201ENST00000293778 BRSK2Q8IWQ3 736 aa21.33■■□□□ 1.01
CXCL16-201ENST00000293778 CCDC105Q8IYK2 499 aa21.33■■□□□ 1.01
CXCL16-201ENST00000293778 ABRAQ8N0Z2 381 aa21.33■■□□□ 1.01
CXCL16-201ENST00000293778 RBBP8NLQ8NC74 664 aaPredicted RBP21.33■■□□□ 1.01
CXCL16-201ENST00000293778 BBXQ8WY36 941 aaPredicted RBP21.33■■□□□ 1.01
CXCL16-201ENST00000293778 MRPL4Q9BYD3 311 aaKnown RBP21.33■■□□□ 1.01
CXCL16-201ENST00000293778 GRHL1Q9NZI5 618 aa21.33■■□□□ 1.01
CXCL16-201ENST00000293778 UMODL1Q5DID0 1318 aa21.33■■□□□ 1
CXCL16-201ENST00000293778 MSCO60682 206 aa21.33■■□□□ 1
CXCL16-201ENST00000293778 ARIH2O95376 493 aa21.33■■□□□ 1
CXCL16-201ENST00000293778 SLC25A27O95847 323 aa21.33■■□□□ 1
CXCL16-201ENST00000293778 SLC1A1P43005 524 aa21.33■■□□□ 1
CXCL16-201ENST00000293778 RPL21P46778 160 aaKnown RBP21.33■■□□□ 1
CXCL16-201ENST00000293778 C2CD6Q53TS8 623 aa21.33■■□□□ 1
CXCL16-201ENST00000293778 LIN9Q5TKA1 542 aa21.33■■□□□ 1
CXCL16-201ENST00000293778 ERO1BQ86YB8 467 aa21.33■■□□□ 1
CXCL16-201ENST00000293778 C12orf50Q8NA57 414 aaPredicted RBP21.33■■□□□ 1
CXCL16-201ENST00000293778 FBXO25Q8TCJ0 367 aa21.33■■□□□ 1
CXCL16-201ENST00000293778 CLMNQ96JQ2 1002 aa21.33■■□□□ 1
CXCL16-201ENST00000293778 TCHPQ9BT92 498 aa21.33■■□□□ 1
CXCL16-201ENST00000293778 CNTN6Q9UQ52 1028 aa21.33■■□□□ 1
CXCL16-201ENST00000293778 TOM1L1O75674 476 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 CFHP08603 1231 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 POTEJP0CG39 1038 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 FNTAP49354 379 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 LLGL2Q6P1M3 1020 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 ZBTB33Q86T24 672 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 PASD1Q8IV76 773 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 BCAS4Q8TDM0 211 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 TCP11Q8WWU5 503 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 GPR20Q99678 358 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 IMPG2Q9BZV3 1241 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 CCDC113Q9H0I3 377 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 PARP2Q9UGN5 583 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 SOCS7O14512 581 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 CXCL11O14625 94 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 FSCN2O14926 492 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 TNFSF9P41273 254 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 AP3M2P53677 418 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 NOMO3P69849 1222 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 LAMTOR4Q0VGL1 99 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 TRIM50Q86XT4 487 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 C11orf70Q9BRQ4 267 aa21.32■■□□□ 1
CXCL16-201ENST00000293778 NOP56O00567 594 aaKnown RBP21.31■■□□□ 1
CXCL16-201ENST00000293778 SRGAP2CP0DJJ0 459 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 HSDL1Q3SXM5 330 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 AGBL2Q5U5Z8 902 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 CDCA2Q69YH5 1023 aaPredicted RBP21.31■■□□□ 1
CXCL16-201ENST00000293778 KCNV1Q6PIU1 500 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 WDR49Q8IV35 697 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 ARFGAP2Q8N6H7 521 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 FGD4Q96M96 766 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 LRRC19Q9H756 370 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 ADAM22Q9P0K1 906 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 AGTPBP1Q9UPW5 1226 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 PTPN22Q9Y2R2 807 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.31■■□□□ 1
CXCL16-201ENST00000293778 PASKQ96RG2 1323 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 THAP12O43422 761 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 FAM189A1O60320 539 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 LGR5O75473 907 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 HPDP32754 393 aaPredicted RBP21.31■■□□□ 1
CXCL16-201ENST00000293778 PMS2P54278 862 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 EIF3BP55884 814 aaKnown RBP21.31■■□□□ 1
CXCL16-201ENST00000293778 GUCY1A3Q02108 690 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 IFFO1Q0D2I5 559 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 MKRN4PQ13434 485 aaPredicted RBP21.31■■□□□ 1
CXCL16-201ENST00000293778 MXD4Q14582 209 aaPredicted RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms