RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CENPPQ6IPU0 288 aa29.16■■■□□ 2.26
SSU72-201ENST00000291386 TMC7Q7Z402 723 aa29.16■■■□□ 2.26
SSU72-201ENST00000291386 EFCAB13Q8IY85 973 aa29.16■■■□□ 2.26
SSU72-201ENST00000291386 GPR62Q9BZJ7 368 aa29.16■■■□□ 2.26
SSU72-201ENST00000291386 NUP62CLQ9H1M0 184 aa29.16■■■□□ 2.26
SSU72-201ENST00000291386 SF3B1O75533 1304 aaKnown RBP eCLIP29.16■■■□□ 2.262e-6■■■■■ 141.7
SSU72-201ENST00000291386 ELAVL2Q12926 359 aaKnown RBP29.15■■■□□ 2.26
SSU72-201ENST00000291386 SMC1AQ14683 1233 aaKnown RBP29.15■■■□□ 2.26
SSU72-201ENST00000291386 GPR65Q8IYL9 337 aa29.15■■■□□ 2.26
SSU72-201ENST00000291386 C3orf58Q8NDZ4 430 aa29.15■■■□□ 2.26
SSU72-201ENST00000291386 MICAL1Q8TDZ2 1067 aa29.15■■■□□ 2.26
SSU72-201ENST00000291386 NOC3LQ8WTT2 800 aaKnown RBP29.15■■■□□ 2.26
SSU72-201ENST00000291386 PPP2R3CQ969Q6 453 aa29.15■■■□□ 2.26
SSU72-201ENST00000291386 MFSD14AQ96MC6 490 aa29.15■■■□□ 2.26
SSU72-201ENST00000291386 ENTPD7Q9NQZ7 604 aa29.15■■■□□ 2.26
SSU72-201ENST00000291386 CHST7Q9NS84 486 aa29.15■■■□□ 2.26
SSU72-201ENST00000291386 MBD3O95983 291 aa29.14■■■□□ 2.26
SSU72-201ENST00000291386 CYP24A1Q07973 514 aa29.14■■■□□ 2.26
SSU72-201ENST00000291386 STIM1Q13586 685 aa29.14■■■□□ 2.26
SSU72-201ENST00000291386 PSMD6Q15008 389 aa29.14■■■□□ 2.26
SSU72-201ENST00000291386 TCEAL5Q5H9L2 206 aa29.14■■■□□ 2.26
SSU72-201ENST00000291386 ISM2Q6H9L7 571 aa29.14■■■□□ 2.26
SSU72-201ENST00000291386 MRPL43Q8N983 215 aaKnown RBP29.14■■■□□ 2.26
SSU72-201ENST00000291386 DHTKD1Q96HY7 919 aaPredicted RBP29.14■■■□□ 2.26
SSU72-201ENST00000291386 PDE11AQ9HCR9 933 aa29.14■■■□□ 2.26
SSU72-201ENST00000291386 SSX2IPQ9Y2D8 614 aa29.14■■■□□ 2.26
SSU72-201ENST00000291386 MAPK13O15264 365 aa29.13■■■□□ 2.25
SSU72-201ENST00000291386 LILRB3O75022 631 aa29.13■■■□□ 2.25
SSU72-201ENST00000291386 RPL13P26373 211 aaKnown RBP29.13■■■□□ 2.25
SSU72-201ENST00000291386 MCM4P33991 863 aa29.13■■■□□ 2.25
SSU72-201ENST00000291386 USP41Q3LFD5 358 aa29.13■■■□□ 2.25
SSU72-201ENST00000291386 PLPP4Q5VZY2 271 aa29.13■■■□□ 2.25
SSU72-201ENST00000291386 TAS1R1Q7RTX1 841 aa29.13■■■□□ 2.25
SSU72-201ENST00000291386 MICALL1Q8N3F8 863 aa29.13■■■□□ 2.25
SSU72-201ENST00000291386 RDH13Q8NBN7 331 aa29.13■■■□□ 2.25
SSU72-201ENST00000291386 HASPINQ8TF76 798 aa29.13■■■□□ 2.25
SSU72-201ENST00000291386 CACTINQ8WUQ7 758 aaKnown RBP29.13■■■□□ 2.25
SSU72-201ENST00000291386 PCDHGC5Q9Y5F6 944 aa29.13■■■□□ 2.25
SSU72-201ENST00000291386 ANO9A1A5B4 782 aa29.12■■■□□ 2.25
SSU72-201ENST00000291386 C2orf71A6NGG8 1288 aa29.12■■■□□ 2.25
SSU72-201ENST00000291386 PPP1R3GB7ZBB8 358 aa29.12■■■□□ 2.25
SSU72-201ENST00000291386 BIN1O00499 593 aa29.12■■■□□ 2.25
SSU72-201ENST00000291386 TRAPPC3O43617 180 aa29.12■■■□□ 2.25
SSU72-201ENST00000291386 PAX3P23760 479 aa29.12■■■□□ 2.25
SSU72-201ENST00000291386 DSG1Q02413 1049 aa29.12■■■□□ 2.25
SSU72-201ENST00000291386 KIAA0319Q5VV43 1072 aa29.12■■■□□ 2.25
SSU72-201ENST00000291386 DPP3Q9NY33 737 aa29.12■■■□□ 2.25
SSU72-201ENST00000291386 HIDE1A8MVS5 230 aa29.11■■■□□ 2.25
SSU72-201ENST00000291386 PIRO00625 290 aa29.11■■■□□ 2.25
SSU72-201ENST00000291386 PSMA7O14818 248 aa29.11■■■□□ 2.25
SSU72-201ENST00000291386 CXCL14O95715 111 aa29.11■■■□□ 2.25
SSU72-201ENST00000291386 CD44P16070 742 aaKnown RBP29.11■■■□□ 2.25
SSU72-201ENST00000291386 NR2F2P24468 414 aa29.11■■■□□ 2.25
SSU72-201ENST00000291386 IGFBP6P24592 240 aaPredicted RBP29.11■■■□□ 2.25
SSU72-201ENST00000291386 CCNE1P24864 410 aa29.11■■■□□ 2.25
SSU72-201ENST00000291386 GLUD2P49448 558 aa29.11■■■□□ 2.25
SSU72-201ENST00000291386 GUCY2FP51841 1108 aa29.11■■■□□ 2.25
SSU72-201ENST00000291386 COL19A1Q14993 1142 aa29.11■■■□□ 2.25
SSU72-201ENST00000291386 PTPN14Q15678 1187 aa29.11■■■□□ 2.25
SSU72-201ENST00000291386 CCDC85BQ15834 202 aaPredicted RBP29.11■■■□□ 2.25
SSU72-201ENST00000291386 C9orf57Q5W0N0 161 aa29.11■■■□□ 2.25
SSU72-201ENST00000291386 FOXR2Q6PJQ5 311 aa29.11■■■□□ 2.25
SSU72-201ENST00000291386 ADGRD2Q7Z7M1 963 aa29.11■■■□□ 2.25
SSU72-201ENST00000291386 WDR49Q8IV35 697 aa29.11■■■□□ 2.25
SSU72-201ENST00000291386 CDCA3Q99618 268 aaPredicted RBP29.11■■■□□ 2.25
SSU72-201ENST00000291386 VWA8A3KMH1 1905 aa29.1■■■□□ 2.25
SSU72-201ENST00000291386 NCK2O43639 380 aa29.1■■■□□ 2.25
SSU72-201ENST00000291386 CSPG5O95196 566 aa29.1■■■□□ 2.25
SSU72-201ENST00000291386 URODP06132 367 aa29.1■■■□□ 2.25
SSU72-201ENST00000291386 LRRC63Q05C16 580 aa29.1■■■□□ 2.25
SSU72-201ENST00000291386 ADAM9Q13443 819 aa29.1■■■□□ 2.25
SSU72-201ENST00000291386 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.1■■■□□ 2.25
SSU72-201ENST00000291386 ZC3H3Q8IXZ2 948 aaKnown RBP29.1■■■□□ 2.25
SSU72-201ENST00000291386 TSG101Q99816 390 aa29.1■■■□□ 2.25
SSU72-201ENST00000291386 MRPL17Q9NRX2 175 aaKnown RBP29.1■■■□□ 2.25
SSU72-201ENST00000291386 INTS13Q9NVM9 706 aa29.1■■■□□ 2.25
SSU72-201ENST00000291386 FRMD4BQ9Y2L6 1034 aa29.1■■■□□ 2.25
SSU72-201ENST00000291386 FSD2A1L4K1 749 aa29.09■■■□□ 2.25
SSU72-201ENST00000291386 SLC34A2O95436 690 aa29.09■■■□□ 2.25
SSU72-201ENST00000291386 FGFR3P22607 806 aa29.09■■■□□ 2.25
SSU72-201ENST00000291386 AARSP49588 968 aaKnown RBP eCLIP29.09■■■□□ 2.25
SSU72-201ENST00000291386 CASP4P49662 377 aa29.09■■■□□ 2.25
SSU72-201ENST00000291386 MCCD1P59942 119 aaPredicted RBP29.09■■■□□ 2.25
SSU72-201ENST00000291386 TFAMQ00059 246 aaKnown RBP29.09■■■□□ 2.25
SSU72-201ENST00000291386 HYAL1Q12794 435 aa29.09■■■□□ 2.25
SSU72-201ENST00000291386 DUSP6Q16828 381 aa29.09■■■□□ 2.25
SSU72-201ENST00000291386 FAM171A1Q5VUB5 890 aa29.09■■■□□ 2.25
SSU72-201ENST00000291386 ANKRD40Q6AI12 368 aa29.09■■■□□ 2.25
SSU72-201ENST00000291386 TMEM130Q8N3G9 435 aa29.09■■■□□ 2.25
SSU72-201ENST00000291386 CGRRF1Q99675 332 aa29.09■■■□□ 2.25
SSU72-201ENST00000291386 GZF1Q9H116 711 aaPredicted RBP29.09■■■□□ 2.25
SSU72-201ENST00000291386 NUB1Q9Y5A7 615 aa29.09■■■□□ 2.25
SSU72-201ENST00000291386 BRCC3P46736 316 aa29.08■■■□□ 2.25
SSU72-201ENST00000291386 PMS1P54277 932 aaKnown RBP29.08■■■□□ 2.25
SSU72-201ENST00000291386 CLDN10P78369 228 aa29.08■■■□□ 2.25
SSU72-201ENST00000291386 ENPEPQ07075 957 aa29.08■■■□□ 2.25
SSU72-201ENST00000291386 DUOXA2Q1HG44 320 aa29.08■■■□□ 2.25
SSU72-201ENST00000291386 RBM43Q6ZSC3 357 aaKnown RBP29.08■■■□□ 2.25
SSU72-201ENST00000291386 C1orf127Q8N9H9 656 aa29.08■■■□□ 2.25
SSU72-201ENST00000291386 CXorf38Q8TB03 319 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms