RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.42□□□□□ -0.58
SNF8-201ENST00000290330 IGSF9Q9P2J2 1179 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 EPS15L1Q9UBC2 864 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 NUB1Q9Y5A7 615 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 CDY1Q9Y6F8 540 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 ZNF318Q5VUA4 2279 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 TTC26A0AVF1 554 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 HNRNPDLO14979 420 aaKnown RBP11.41□□□□□ -0.58
SNF8-201ENST00000290330 SYN3O14994 580 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 STX6O43752 255 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 FAM189A1O60320 539 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 TBCAO75347 108 aaKnown RBP11.41□□□□□ -0.58
SNF8-201ENST00000290330 HSP90AA1P07900 732 aaKnown RBP11.41□□□□□ -0.58
SNF8-201ENST00000290330 LAMP2P13473 410 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 NMT1P30419 496 aaKnown RBP11.41□□□□□ -0.58
SNF8-201ENST00000290330 HOXA9P31269 272 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 TNFSF9P41273 254 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 MATR3P43243 847 aaKnown RBP eCLIP11.41□□□□□ -0.58
SNF8-201ENST00000290330 GTF2BQ00403 316 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 NHLH1Q02575 133 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 SPAG1Q07617 926 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 SLC39A14Q15043 492 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 ZBTB6Q15916 424 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 UVSSAQ2YD98 709 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 PPM1LQ5SGD2 360 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 VARS2Q5ST30 1063 aaKnown RBP11.41□□□□□ -0.58
SNF8-201ENST00000290330 AXDND1Q5T1B0 1012 aaPredicted RBP11.41□□□□□ -0.58
SNF8-201ENST00000290330 SLC8B1Q6J4K2 584 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 GRASPQ7Z6J2 395 aaPredicted RBP11.41□□□□□ -0.58
SNF8-201ENST00000290330 KRI1Q8N9T8 703 aaKnown RBP11.41□□□□□ -0.58
SNF8-201ENST00000290330 PRSS33Q8NF86 280 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 SLC7A14Q8TBB6 771 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 RSAD2Q8WXG1 361 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 USP28Q96RU2 1077 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 CHMP5Q9NZZ3 219 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 STK17AQ9UEE5 414 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 CCDC39Q9UFE4 941 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 TUBGCP4Q9UGJ1 667 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 CIZ1Q9ULV3 898 aaPredicted RBP11.41□□□□□ -0.58
SNF8-201ENST00000290330 DUSP12Q9UNI6 340 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 MORC2Q9Y6X9 1032 aaPredicted RBP11.41□□□□□ -0.58
SNF8-201ENST00000290330 VWA8A3KMH1 1905 aa11.41□□□□□ -0.58
SNF8-201ENST00000290330 TRIP11Q15643 1979 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 A0A0B4J269 797 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 OGTO15294 1046 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 CCL16O15467 120 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 TBC1D4O60343 1298 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 FSHRP23945 695 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 ABCD1P33897 745 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 MCM4P33991 863 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 NTHL1P78549 312 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 ROR1Q01973 937 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 MRPL58Q14197 206 aaKnown RBP11.4□□□□□ -0.58
SNF8-201ENST00000290330 KYAT1Q16773 422 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 ZC2HC1CQ53FD0 456 aaPredicted RBP11.4□□□□□ -0.58
SNF8-201ENST00000290330 ZBTB41Q5SVQ8 909 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 SLC39A4Q6P5W5 647 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 RTL10Q7L3V2 364 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 GET4Q7L5D6 327 aaPredicted RBP11.4□□□□□ -0.58
SNF8-201ENST00000290330 DYMQ7RTS9 669 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 MAP4K3Q8IVH8 894 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 TMEM130Q8N3G9 435 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 ZNF461Q8TAF7 563 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 KIF12Q96FN5 646 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 SUSD3Q96L08 255 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 PRRX2Q99811 253 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 ST6GALNAC4Q9H4F1 302 aa11.4□□□□□ -0.58
SNF8-201ENST00000290330 ZSCAN16Q9H4T2 348 aaPredicted RBP11.4□□□□□ -0.58
SNF8-201ENST00000290330 MTCL1Q9Y4B5 1905 aaKnown RBP11.4□□□□□ -0.58
SNF8-201ENST00000290330 MUC6Q6W4X9 2439 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 WDR27A2RRH5 827 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 LACTBL1A8MY62 500 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 ANKRD63C9JTQ0 380 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 ANHXE9PGG2 379 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 NARSO43776 548 aaKnown RBP11.39□□□□□ -0.59
SNF8-201ENST00000290330 XYLBO75191 536 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 ABLIM3O94929 683 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 ADRB2P07550 413 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 POU2F2P09086 479 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 CYP3A5P20815 502 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 LRPAP1P30533 357 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 TXLNAP40222 546 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 NASPP49321 788 aaPredicted RBP11.39□□□□□ -0.59
SNF8-201ENST00000290330 PPP2R3AQ06190 1150 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 TCF15Q12870 199 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 ENOX2Q16206 610 aaKnown RBP11.39□□□□□ -0.59
SNF8-201ENST00000290330 RRAGBQ5VZM2 374 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 ZNF720Q7Z2F6 126 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 SFR1Q86XK3 245 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 SLC44A3Q8N4M1 653 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 DDX12PQ92771 950 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 NXPE3Q969Y0 559 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 MSTO1Q9BUK6 570 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 RPF1Q9H9Y2 349 aaKnown RBP11.39□□□□□ -0.59
SNF8-201ENST00000290330 DNMT3BQ9UBC3 853 aaKnown RBP11.39□□□□□ -0.59
SNF8-201ENST00000290330 FBXL5Q9UKA1 691 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 CPSF3Q9UKF6 684 aaKnown RBP11.39□□□□□ -0.59
SNF8-201ENST00000290330 UBQLN1Q9UMX0 589 aaKnown RBP11.39□□□□□ -0.59
SNF8-201ENST00000290330 POLIQ9UNA4 740 aa11.39□□□□□ -0.59
SNF8-201ENST00000290330 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms