RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 CEP72Q9P209 647 aa20.39■□□□□ 0.86
PDLIM3-202ENST00000284770 APEX2Q9UBZ4 518 aa20.39■□□□□ 0.86
PDLIM3-202ENST00000284770 LUC7L2Q9Y383 392 aaKnown RBP20.39■□□□□ 0.86
PDLIM3-202ENST00000284770 MKI67P46013 3256 aaKnown RBP20.39■□□□□ 0.85
PDLIM3-202ENST00000284770 ZC3H11AO75152 810 aaKnown RBP eCLIP20.39■□□□□ 0.85
PDLIM3-202ENST00000284770 CST3P01034 146 aaPredicted RBP20.39■□□□□ 0.85
PDLIM3-202ENST00000284770 TCTN1Q2MV58 587 aa20.39■□□□□ 0.85
PDLIM3-202ENST00000284770 GLRA4Q5JXX5 417 aa20.39■□□□□ 0.85
PDLIM3-202ENST00000284770 MFSD5Q6N075 450 aa20.39■□□□□ 0.85
PDLIM3-202ENST00000284770 C1orf127Q8N9H9 656 aa20.39■□□□□ 0.85
PDLIM3-202ENST00000284770 RNF169Q8NCN4 708 aa20.39■□□□□ 0.85
PDLIM3-202ENST00000284770 CCDC112Q8NEF3 446 aa20.39■□□□□ 0.85
PDLIM3-202ENST00000284770 VWCEQ96DN2 955 aa20.39■□□□□ 0.85
PDLIM3-202ENST00000284770 ZFP42Q96MM3 310 aa20.39■□□□□ 0.85
PDLIM3-202ENST00000284770 RSAD1Q9HA92 442 aa20.39■□□□□ 0.85
PDLIM3-202ENST00000284770 RALGAPA2Q2PPJ7 1873 aa20.38■□□□□ 0.85
PDLIM3-202ENST00000284770 SCN5AQ14524 2016 aa20.38■□□□□ 0.85
PDLIM3-202ENST00000284770 MLH1P40692 756 aa20.38■□□□□ 0.85
PDLIM3-202ENST00000284770 POLR2FP61218 127 aaKnown RBP20.38■□□□□ 0.85
PDLIM3-202ENST00000284770 TRPC3Q13507 836 aa20.38■□□□□ 0.85
PDLIM3-202ENST00000284770 PHLDB3Q6NSJ2 640 aa20.38■□□□□ 0.85
PDLIM3-202ENST00000284770 CACNA2D4Q7Z3S7 1137 aa20.38■□□□□ 0.85
PDLIM3-202ENST00000284770 TMEM199Q8N511 208 aa20.38■□□□□ 0.85
PDLIM3-202ENST00000284770 GSTCDQ8NEC7 633 aa20.38■□□□□ 0.85
PDLIM3-202ENST00000284770 ZNF397Q8NF99 534 aaPredicted RBP20.38■□□□□ 0.85
PDLIM3-202ENST00000284770 KIAA1524Q8TCG1 905 aa20.38■□□□□ 0.85
PDLIM3-202ENST00000284770 ABHD8Q96I13 439 aa20.38■□□□□ 0.85
PDLIM3-202ENST00000284770 GAD1Q99259 594 aa20.38■□□□□ 0.85
PDLIM3-202ENST00000284770 DPP3Q9NY33 737 aa20.38■□□□□ 0.85
PDLIM3-202ENST00000284770 ITGA11Q9UKX5 1188 aa20.38■□□□□ 0.85
PDLIM3-202ENST00000284770 UBQLN1Q9UMX0 589 aaKnown RBP20.38■□□□□ 0.85
PDLIM3-202ENST00000284770 DAAM1Q9Y4D1 1078 aa20.38■□□□□ 0.85
PDLIM3-202ENST00000284770 ARL5CA6NH57 179 aa20.37■□□□□ 0.85
PDLIM3-202ENST00000284770 PTGESO14684 152 aa20.37■□□□□ 0.85
PDLIM3-202ENST00000284770 FECHP22830 423 aa20.37■□□□□ 0.85
PDLIM3-202ENST00000284770 MSNP26038 577 aaKnown RBP20.37■□□□□ 0.85
PDLIM3-202ENST00000284770 KRT9P35527 623 aa20.37■□□□□ 0.85
PDLIM3-202ENST00000284770 ZBED6P86452 979 aa20.37■□□□□ 0.85
PDLIM3-202ENST00000284770 WDR44Q5JSH3 913 aa20.37■□□□□ 0.85
PDLIM3-202ENST00000284770 SCARA3Q6AZY7 606 aa20.37■□□□□ 0.85
PDLIM3-202ENST00000284770 CNKSR3Q6P9H4 555 aa20.37■□□□□ 0.85
PDLIM3-202ENST00000284770 BEST2Q8NFU1 509 aa20.37■□□□□ 0.85
PDLIM3-202ENST00000284770 CXorf38Q8TB03 319 aa20.37■□□□□ 0.85
PDLIM3-202ENST00000284770 PI4K2AQ9BTU6 479 aa20.37■□□□□ 0.85
PDLIM3-202ENST00000284770 ELAC1Q9H777 363 aaKnown RBP20.37■□□□□ 0.85
PDLIM3-202ENST00000284770 ABHD10Q9NUJ1 306 aa20.37■□□□□ 0.85
PDLIM3-202ENST00000284770 RNF19AQ9NV58 838 aa20.37■□□□□ 0.85
PDLIM3-202ENST00000284770 SIX4Q9UIU6 781 aa20.37■□□□□ 0.85
PDLIM3-202ENST00000284770 XPOTO43592 962 aaKnown RBP20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 ITGB3P05106 788 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 CSF2RAP15509 400 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 IBSPP21815 317 aaPredicted RBP20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 RFX1P22670 979 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 BAP1Q92560 729 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 PPP1R10Q96QC0 940 aaKnown RBP20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 RPS6KC1Q96S38 1066 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 DNAJC7Q99615 494 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 NAA15Q9BXJ9 866 aaKnown RBP20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 IMPG2Q9BZV3 1241 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 NLRC4Q9NPP4 1024 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 TMEM161AQ9NX61 479 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 PRKAG2Q9UGJ0 569 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 FHOD1Q9Y613 1164 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 TET1Q8NFU7 2136 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 ASS1P00966 412 aaKnown RBP20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 KRT19P08727 400 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 CYP3A5P20815 502 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 MYL6P60660 151 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 IKBKEQ14164 716 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 SGSM1Q2NKQ1 1148 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 IQCEQ6IPM2 695 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 GJB7Q6PEY0 223 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 C18orf25Q96B23 403 aaPredicted RBP20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 NT5C1BQ96P26 610 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 BAG1Q99933 345 aaPredicted RBP20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 TUBGCP4Q9UGJ1 667 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 DNAJC12Q9UKB3 198 aa20.36■□□□□ 0.85
PDLIM3-202ENST00000284770 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.35■□□□□ 0.85
PDLIM3-202ENST00000284770 INPPL1O15357 1258 aa20.35■□□□□ 0.85
PDLIM3-202ENST00000284770 THP07101 528 aa20.35■□□□□ 0.85
PDLIM3-202ENST00000284770 AFF1P51825 1210 aaKnown RBP20.35■□□□□ 0.85
PDLIM3-202ENST00000284770 GUCY2FP51841 1108 aa20.35■□□□□ 0.85
PDLIM3-202ENST00000284770 ARHGEF19Q8IW93 802 aa20.35■□□□□ 0.85
PDLIM3-202ENST00000284770 RPUSD2Q8IZ73 545 aaKnown RBP20.35■□□□□ 0.85
PDLIM3-202ENST00000284770 OR8K1Q8NGG5 319 aa20.35■□□□□ 0.85
PDLIM3-202ENST00000284770 XYLT2Q9H1B5 865 aa20.35■□□□□ 0.85
PDLIM3-202ENST00000284770 UBE2TQ9NPD8 197 aaPredicted RBP20.35■□□□□ 0.85
PDLIM3-202ENST00000284770 SLC38A7Q9NVC3 462 aa20.35■□□□□ 0.85
PDLIM3-202ENST00000284770 MIOSQ9NXC5 875 aa20.35■□□□□ 0.85
PDLIM3-202ENST00000284770 PLAGL2Q9UPG8 496 aa20.35■□□□□ 0.85
PDLIM3-202ENST00000284770 NRDCO43847 1150 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 OFD1O75665 1012 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 PFKMP08237 780 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 POLR2BP30876 1174 aaKnown RBP20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 NOP14P78316 857 aaKnown RBP20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 RBP5P82980 135 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 RRAGAQ7L523 313 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 TMEM130Q8N3G9 435 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 HELQQ8TDG4 1101 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 235.4 ms