RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 PLEKHA4Q9H4M7 779 aa11.81□□□□□ -0.52
GGPS1-201ENST00000282841 KIAA1586Q9HCI6 787 aa11.81□□□□□ -0.52
GGPS1-201ENST00000282841 CREBZFQ9NS37 354 aa11.81□□□□□ -0.52
GGPS1-201ENST00000282841 PRMT7Q9NVM4 692 aaPredicted RBP11.81□□□□□ -0.52
GGPS1-201ENST00000282841 MYO1AQ9UBC5 1043 aa11.81□□□□□ -0.52
GGPS1-201ENST00000282841 NRCAMQ92823 1304 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 TMEM191BP0C7N4 346 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 HOXA11P31270 313 aaPredicted RBP11.8□□□□□ -0.52
GGPS1-201ENST00000282841 PRKCIP41743 596 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 NOP14P78316 857 aaKnown RBP11.8□□□□□ -0.52
GGPS1-201ENST00000282841 NAB2Q15742 525 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 TEX35Q5T0J7 233 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 USP37Q86T82 979 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 EXOC8Q8IYI6 725 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 EPS8L1Q8TE68 723 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 COG1Q8WTW3 980 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 YY1AP1Q9H869 796 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 RPF1Q9H9Y2 349 aaKnown RBP11.8□□□□□ -0.52
GGPS1-201ENST00000282841 SNTG2Q9NY99 539 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 P4HA2O15460 535 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 ASAP2O43150 1006 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 CYP11B1P15538 503 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 SLC10A6Q3KNW5 377 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 GDF6Q6KF10 455 aaPredicted RBP11.8□□□□□ -0.52
GGPS1-201ENST00000282841 CPNE8Q86YQ8 564 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 FAM71AQ8IYT1 594 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 SHC3Q92529 594 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 MS4A14Q96JA4 679 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 RNF39Q9H2S5 420 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 NXF3Q9H4D5 531 aaKnown RBP11.8□□□□□ -0.52
GGPS1-201ENST00000282841 XPNPEP3Q9NQH7 507 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 CACNG4Q9UBN1 327 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 TNFSF13BQ9Y275 285 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 TRIP11Q15643 1979 aa11.8□□□□□ -0.52
GGPS1-201ENST00000282841 C17orf102A2RUQ5 167 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 TMEM110-MUSTN1A8MSY1 372 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 IGHA2P01877 340 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 FTLP02792 175 aaPredicted RBP11.79□□□□□ -0.52
GGPS1-201ENST00000282841 ASGR1P07306 291 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 YY1P25490 414 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 CLDN10P78369 228 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 KCNA10Q16322 511 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 DPH6Q7L8W6 267 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 CPA5Q8WXQ8 436 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 BTBD6Q96KE9 485 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 MYO6Q9UM54 1294 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 PIN4Q9Y237 131 aaKnown RBP11.79□□□□□ -0.52
GGPS1-201ENST00000282841 PCDHB4Q9Y5E5 795 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 DUSP11O75319 330 aaKnown RBP11.79□□□□□ -0.52
GGPS1-201ENST00000282841 ITGB3P05106 788 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 RARBP10826 455 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 NFX1Q12986 1120 aaKnown RBP11.79□□□□□ -0.52
GGPS1-201ENST00000282841 TRPC3Q13507 836 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 KIF22Q14807 665 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 DUOXA2Q1HG44 320 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 VPS36Q86VN1 386 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 SYT11Q9BT88 431 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 NOCTQ9UK39 431 aaKnown RBP11.79□□□□□ -0.52
GGPS1-201ENST00000282841 PPME1Q9Y570 386 aa11.79□□□□□ -0.52
GGPS1-201ENST00000282841 MEIS3P2A8K0S8 358 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 PDE2AO00408 941 aaPredicted RBP11.78□□□□□ -0.52
GGPS1-201ENST00000282841 PPEF2O14830 753 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 TACC1O75410 805 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 H2AFZP0C0S5 128 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 APLP1P51693 650 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 LLGL1Q15334 1064 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 H2AFVQ71UI9 128 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 SESTD1Q86VW0 696 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 RABGGTAQ92696 567 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 NOX5Q96PH1 765 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 MMS19Q96T76 1030 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 BZW2Q9Y6E2 419 aaKnown RBP11.78□□□□□ -0.52
GGPS1-201ENST00000282841 SIP14410 1827 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 GRID2IPA4D2P6 1211 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 RRN3P2A6NIE6 340 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 HAS3O00219 553 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 CTIFO43310 598 aaKnown RBP11.78□□□□□ -0.52
GGPS1-201ENST00000282841 GTF2H1P32780 548 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 AMPD2Q01433 879 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 FMO1Q01740 532 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 CUL2Q13617 745 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 BMS1Q14692 1282 aaKnown RBP11.78□□□□□ -0.52
GGPS1-201ENST00000282841 WDR72Q3MJ13 1102 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 C1orf127Q8N9H9 656 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 C18orf25Q96B23 403 aaPredicted RBP11.78□□□□□ -0.52
GGPS1-201ENST00000282841 ZMAT2Q96NC0 199 aaKnown RBP11.78□□□□□ -0.52
GGPS1-201ENST00000282841 GCOM2Q9BZD3 368 aaPredicted RBP11.78□□□□□ -0.52
GGPS1-201ENST00000282841 SIX4Q9UIU6 781 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 CDC23Q9UJX2 597 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 COG5Q9UP83 839 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 COL1A2P08123 1366 aa11.78□□□□□ -0.52
GGPS1-201ENST00000282841 A0A1B0GUA9 196 aa11.77□□□□□ -0.52
GGPS1-201ENST00000282841 MBLAC1A4D2B0 266 aaPredicted RBP11.77□□□□□ -0.52
GGPS1-201ENST00000282841 GJB6O95452 261 aa11.77□□□□□ -0.52
GGPS1-201ENST00000282841 ALDH1A1P00352 501 aa11.77□□□□□ -0.52
GGPS1-201ENST00000282841 EIF4BP23588 611 aaKnown RBP11.77□□□□□ -0.52
GGPS1-201ENST00000282841 IGFBP6P24592 240 aaPredicted RBP11.77□□□□□ -0.52
GGPS1-201ENST00000282841 ADAM17P78536 824 aa11.77□□□□□ -0.52
GGPS1-201ENST00000282841 SNX17Q15036 470 aa11.77□□□□□ -0.52
GGPS1-201ENST00000282841 DAB2IPQ5VWQ8 1189 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms