RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 NLRX1Q86UT6 975 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 CCDC84Q86UT8 332 aaPredicted RBP9.75□□□□□ -0.85
PDGFC-201ENST00000274071 LRRC6Q86X45 466 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 ANKMY2Q8IV38 441 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 PTCD2Q8WV60 388 aaKnown RBP9.75□□□□□ -0.85
PDGFC-201ENST00000274071 WASF1Q92558 559 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 ERLEC1Q96DZ1 483 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 PRPF18Q99633 342 aaKnown RBP9.75□□□□□ -0.85
PDGFC-201ENST00000274071 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.75□□□□□ -0.85
PDGFC-201ENST00000274071 OSBPL6Q9BZF3 934 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 IRF2BPLQ9H1B7 796 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 DNAJC17Q9NVM6 304 aaKnown RBP9.75□□□□□ -0.85
PDGFC-201ENST00000274071 TMOD3Q9NYL9 352 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 ATP6V0A2Q9Y487 856 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 MAD1L1Q9Y6D9 718 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 CEPT1Q9Y6K0 416 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 TLL2Q9Y6L7 1015 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 GLI3P10071 1580 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 TESPA1A2RU30 521 aaPredicted RBP9.75□□□□□ -0.85
PDGFC-201ENST00000274071 C2CD2LO14523 706 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 ZNF213O14771 459 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 ATMINO43313 823 aaPredicted RBP9.75□□□□□ -0.85
PDGFC-201ENST00000274071 CDH3P22223 829 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 ATP5DP30049 168 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 PPP1R2P41236 205 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 HSD17B4P51659 736 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 ZNF174Q15697 407 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 KCNJ8Q15842 424 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 ANKRD20A4Q4UJ75 823 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 FYB2Q5VWT5 728 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 PPP1R2P3Q6NXS1 205 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 GIMAP8Q8ND71 665 aaPredicted RBP9.75□□□□□ -0.85
PDGFC-201ENST00000274071 PPP1R14CQ8TAE6 165 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 ACTRT2Q8TDY3 377 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 NSL1Q96IY1 281 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 CCDC85AQ96PX6 553 aaPredicted RBP9.75□□□□□ -0.85
PDGFC-201ENST00000274071 MRPL1Q9BYD6 325 aaKnown RBP9.75□□□□□ -0.85
PDGFC-201ENST00000274071 ARMCX3Q9UH62 379 aaPredicted RBP9.75□□□□□ -0.85
PDGFC-201ENST00000274071 SHANK3Q9BYB0 1731 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 TBKBP1A7MCY6 615 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 K7EPI3 171 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 EDF1O60869 148 aaKnown RBP9.75□□□□□ -0.85
PDGFC-201ENST00000274071 PHF2O75151 1096 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 SERPING1P05155 500 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 PGM1P36871 562 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 RAP1GDS1P52306 607 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 WASHC5Q12768 1159 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 IFIT5Q13325 482 aaKnown RBP9.75□□□□□ -0.85
PDGFC-201ENST00000274071 PDE1CQ14123 709 aaPredicted RBP9.75□□□□□ -0.85
PDGFC-201ENST00000274071 SF3B4Q15427 424 aaKnown RBP eCLIP9.75□□□□□ -0.85
PDGFC-201ENST00000274071 LPCAT4Q643R3 524 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 BORAQ6PGQ7 559 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 PPP1R21Q6ZMI0 780 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 ADAT2Q7Z6V5 191 aaKnown RBP9.75□□□□□ -0.85
PDGFC-201ENST00000274071 JAMLQ86YT9 394 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 SPERTQ8NA61 448 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 FAM161BQ96MY7 647 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 LAMB4A4D0S4 1761 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 TXNDC9O14530 226 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 KLRC4O43908 158 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 ESRRAP11474 423 aaPredicted RBP9.74□□□□□ -0.85
PDGFC-201ENST00000274071 IFNAR1P17181 557 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 PPARGP37231 505 aaPredicted RBP9.74□□□□□ -0.85
PDGFC-201ENST00000274071 RPL21P46778 160 aaKnown RBP9.74□□□□□ -0.85
PDGFC-201ENST00000274071 NCOA4Q13772 614 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 KYNUQ16719 465 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 RIPOR1Q6ZS17 1223 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 NEK10Q6ZWH5 1172 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 RFPL4BQ6ZWI9 263 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 CENPSQ8N2Z9 138 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 ALLCQ8N6M5 410 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 GOLM1Q8NBJ4 401 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 P2RX5Q93086 422 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 EGLN2Q96KS0 407 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 PANX3Q96QZ0 392 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 SIAEQ9HAT2 523 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 CYLDQ9NQC7 956 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 VPS51Q9UID3 782 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 KAT6BQ8WYB5 2073 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 UBR2Q8IWV8 1755 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 ARFGEF2Q9Y6D5 1785 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 AFDNP55196 1824 aaKnown RBP9.74□□□□□ -0.85
PDGFC-201ENST00000274071 KCPQ6ZWJ8 1503 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 TMEM114B3SHH9 223 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 CYTH3O43739 400 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 ACSL3O95573 720 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 CHRNB1P11230 501 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 ZNF12P17014 697 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 CCNE1P24864 410 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 SERPINB6P35237 376 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 GPC3P51654 580 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 TUBA1BP68363 451 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 PTGDRQ13258 359 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 PDAP1Q13442 181 aaKnown RBP9.74□□□□□ -0.85
PDGFC-201ENST00000274071 SEPT6Q14141 434 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 RRP1BQ14684 758 aaKnown RBP9.74□□□□□ -0.85
PDGFC-201ENST00000274071 CNGA3Q16281 694 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 NDUFA5Q16718 116 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 CLEC4GQ6UXB4 293 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 TUBA1AQ71U36 451 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms