RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 TRAIPQ9BWF2 469 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 CDCA7Q9BWT1 371 aaPredicted RBP13.73□□□□□ -0.21
COL8A1-202ENST00000273342 A6NHS1 94 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 CALRP27797 417 aaKnown RBP13.72□□□□□ -0.21
COL8A1-202ENST00000273342 POLE2P56282 527 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 C1orf220Q5T0J3 134 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 DSTYKQ6XUX3 929 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 PPP1R21Q6ZMI0 780 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 LMNTD2Q8IXW0 634 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 DCLK3Q9C098 648 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 FHDC1Q9C0D6 1143 aaPredicted RBP13.72□□□□□ -0.21
COL8A1-202ENST00000273342 C10orf88Q9H8K7 445 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 FSCN2O14926 492 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 SLC16A4O15374 487 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 NDUFB10O96000 172 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 IFNB1P01574 187 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 HHATQ5VTY9 493 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 PRR5LQ6MZQ0 368 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 STXBP4Q6ZWJ1 553 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 ANKS1BQ7Z6G8 1248 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 TEKT4Q8WW24 435 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 DNAJC9Q8WXX5 260 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 SH3GL3Q99963 347 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 UNC45AQ9H3U1 944 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 DBNDD1Q9H9R9 158 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 HSPBP1Q9NZL4 362 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 USP20Q9Y2K6 914 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 USH1CQ9Y6N9 552 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 TBX3O15119 743 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 ADRB2P07550 413 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 PLS3P13797 630 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 ATF7P17544 494 aaPredicted RBP13.72□□□□□ -0.21
COL8A1-202ENST00000273342 PCNX4Q63HM2 1172 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 SIAH1Q8IUQ4 282 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 C7orf43Q8WVR3 580 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 ZNF577Q9BSK1 485 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 LRMDAQ9H2I8 198 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 KIAA1586Q9HCI6 787 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 ZFP69BQ9UJL9 534 aa13.72□□□□□ -0.21
COL8A1-202ENST00000273342 SCAF8Q9UPN6 1271 aaKnown RBP13.72□□□□□ -0.21
COL8A1-202ENST00000273342 IGLV3-22A0A075B6J6 115 aa13.71□□□□□ -0.21
COL8A1-202ENST00000273342 ALDH3A1P30838 453 aa13.71□□□□□ -0.21
COL8A1-202ENST00000273342 PIK3CAP42336 1068 aa13.71□□□□□ -0.21
COL8A1-202ENST00000273342 CPA2P48052 419 aa13.71□□□□□ -0.21
COL8A1-202ENST00000273342 SLC30A9Q6PML9 568 aa13.71□□□□□ -0.21
COL8A1-202ENST00000273342 PADI6Q6TGC4 694 aa13.71□□□□□ -0.21
COL8A1-202ENST00000273342 TAS1R2Q8TE23 839 aa13.71□□□□□ -0.21
COL8A1-202ENST00000273342 FAM163AQ96GL9 167 aaPredicted RBP13.71□□□□□ -0.21
COL8A1-202ENST00000273342 PRR11Q96HE9 360 aaPredicted RBP13.71□□□□□ -0.21
COL8A1-202ENST00000273342 DDX50Q9BQ39 737 aaKnown RBP13.71□□□□□ -0.21
COL8A1-202ENST00000273342 PAPOLBQ9NRJ5 636 aaKnown RBP13.71□□□□□ -0.21
COL8A1-202ENST00000273342 ASMTLO95671 621 aa13.71□□□□□ -0.22
COL8A1-202ENST00000273342 SERPINB2P05120 415 aa13.71□□□□□ -0.22
COL8A1-202ENST00000273342 ATP2B4P23634 1241 aa13.71□□□□□ -0.22
COL8A1-202ENST00000273342 HADHBP55084 474 aaKnown RBP13.71□□□□□ -0.22
COL8A1-202ENST00000273342 PLCB3Q01970 1234 aa13.71□□□□□ -0.22
COL8A1-202ENST00000273342 RCN2Q14257 317 aa13.71□□□□□ -0.22
COL8A1-202ENST00000273342 EAPPQ56P03 285 aaPredicted RBP13.71□□□□□ -0.22
COL8A1-202ENST00000273342 PLEKHG4Q58EX7 1191 aa13.71□□□□□ -0.22
COL8A1-202ENST00000273342 SYCP2LQ5T4T6 812 aa13.71□□□□□ -0.22
COL8A1-202ENST00000273342 LVRNQ6Q4G3 990 aa13.71□□□□□ -0.22
COL8A1-202ENST00000273342 ZC3H18Q86VM9 953 aaKnown RBP13.71□□□□□ -0.22
COL8A1-202ENST00000273342 ZBED8Q8IZ13 594 aa13.71□□□□□ -0.22
COL8A1-202ENST00000273342 SCYL3Q8IZE3 742 aa13.71□□□□□ -0.22
COL8A1-202ENST00000273342 ATL2Q8NHH9 583 aa13.71□□□□□ -0.22
COL8A1-202ENST00000273342 SMC6Q96SB8 1091 aa13.71□□□□□ -0.22
COL8A1-202ENST00000273342 PLVAPQ9BX97 442 aa13.71□□□□□ -0.22
COL8A1-202ENST00000273342 GLT8D2Q9H1C3 349 aa13.71□□□□□ -0.22
COL8A1-202ENST00000273342 GTF3C4Q9UKN8 822 aa13.71□□□□□ -0.22
COL8A1-202ENST00000273342 KRT36O76013 467 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 PEX3P56589 373 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 JAG1P78504 1218 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 MKRN3Q13064 507 aaKnown RBP13.7□□□□□ -0.22
COL8A1-202ENST00000273342 SPARCL1Q14515 664 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 EFTUD2Q15029 972 aaKnown RBP eCLIP13.7□□□□□ -0.22
COL8A1-202ENST00000273342 RCN1Q15293 331 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 NLRP9Q7RTR0 991 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 OTOAQ7RTW8 1153 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 CCDC125Q86Z20 511 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 FAM71AQ8IYT1 594 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 PHC3Q8NDX5 983 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 POMGNT1Q8WZA1 660 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 NACC1Q96RE7 527 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 DNAJC5Q9H3Z4 198 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 ZNF148Q9UQR1 794 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 ATP8B3O60423 1300 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 CYP1A2P05177 515 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 CFHP08603 1231 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 NEFHP12036 1026 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 ADRA1DP25100 572 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 PRELPP51888 382 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 TAS2R40P59535 323 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 PTK6Q13882 451 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 SEPT7Q16181 437 aaKnown RBP13.7□□□□□ -0.22
COL8A1-202ENST00000273342 ARMC3Q5W041 872 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 TRABD2AQ86V40 505 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 AGGF1Q8N302 714 aaeCLIP13.7□□□□□ -0.22
COL8A1-202ENST00000273342 XXYLT1Q8NBI6 393 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 RFWD2Q8NHY2 731 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 MAML1Q92585 1016 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms