RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 URI1O94763 535 aaPredicted RBP17.59■□□□□ 0.41
TPM1-201ENST00000267996 RPLP2P05387 115 aaKnown RBP17.59■□□□□ 0.41
TPM1-201ENST00000267996 NFICP08651 508 aa17.59■□□□□ 0.41
TPM1-201ENST00000267996 TMEM191BP0C7N4 346 aa17.59■□□□□ 0.41
TPM1-201ENST00000267996 USP8P40818 1118 aa17.59■□□□□ 0.41
TPM1-201ENST00000267996 SGSM1Q2NKQ1 1148 aa17.59■□□□□ 0.41
TPM1-201ENST00000267996 NOP9Q86U38 636 aaKnown RBP17.59■□□□□ 0.41
TPM1-201ENST00000267996 NT5DC4Q86YG4 428 aa17.59■□□□□ 0.41
TPM1-201ENST00000267996 CD302Q8IX05 232 aa17.59■□□□□ 0.41
TPM1-201ENST00000267996 UBR7Q8N806 425 aa17.59■□□□□ 0.41
TPM1-201ENST00000267996 SLAIN1Q8ND83 568 aa17.59■□□□□ 0.41
TPM1-201ENST00000267996 CXorf38Q8TB03 319 aa17.59■□□□□ 0.41
TPM1-201ENST00000267996 U2AF1L4Q8WU68 220 aaKnown RBP17.59■□□□□ 0.41
TPM1-201ENST00000267996 SLC20A1Q8WUM9 679 aa17.59■□□□□ 0.41
TPM1-201ENST00000267996 NAPGQ99747 312 aaPredicted RBP17.59■□□□□ 0.41
TPM1-201ENST00000267996 ARID3AQ99856 593 aa17.59■□□□□ 0.41
TPM1-201ENST00000267996 CELF4Q9BZC1 486 aaKnown RBP17.59■□□□□ 0.41
TPM1-201ENST00000267996 XYLT2Q9H1B5 865 aa17.59■□□□□ 0.41
TPM1-201ENST00000267996 NPTXRO95502 500 aa17.58■□□□□ 0.41
TPM1-201ENST00000267996 H2AFZP0C0S5 128 aa17.58■□□□□ 0.41
TPM1-201ENST00000267996 CYP11B1P15538 503 aa17.58■□□□□ 0.41
TPM1-201ENST00000267996 MYL6P60660 151 aa17.58■□□□□ 0.41
TPM1-201ENST00000267996 MRPS6P82932 125 aaKnown RBP17.58■□□□□ 0.41
TPM1-201ENST00000267996 JADE1Q6IE81 842 aa17.58■□□□□ 0.41
TPM1-201ENST00000267996 H2AFVQ71UI9 128 aa17.58■□□□□ 0.41
TPM1-201ENST00000267996 SLC47A2Q86VL8 602 aa17.58■□□□□ 0.41
TPM1-201ENST00000267996 TRIM58Q8NG06 486 aa17.58■□□□□ 0.41
TPM1-201ENST00000267996 DDX1Q92499 740 aaKnown RBP17.58■□□□□ 0.41
TPM1-201ENST00000267996 TAF4BQ92750 862 aa17.58■□□□□ 0.41
TPM1-201ENST00000267996 CCDC94Q9BW85 323 aaPredicted RBP17.58■□□□□ 0.41
TPM1-201ENST00000267996 IMPG2Q9BZV3 1241 aa17.58■□□□□ 0.41
TPM1-201ENST00000267996 PLEKHA5Q9HAU0 1116 aa17.58■□□□□ 0.41
TPM1-201ENST00000267996 SIX4Q9UIU6 781 aa17.58■□□□□ 0.41
TPM1-201ENST00000267996 C2CD2Q9Y426 696 aa17.58■□□□□ 0.41
TPM1-201ENST00000267996 CITO14578 2027 aa17.58■□□□□ 0.4
TPM1-201ENST00000267996 UMODL1Q5DID0 1318 aa17.58■□□□□ 0.4
TPM1-201ENST00000267996 TACC1O75410 805 aa17.58■□□□□ 0.4
TPM1-201ENST00000267996 CABYRO75952 493 aa17.58■□□□□ 0.4
TPM1-201ENST00000267996 INHAP05111 366 aa17.58■□□□□ 0.4
TPM1-201ENST00000267996 TUBB2AQ13885 445 aa17.58■□□□□ 0.4
TPM1-201ENST00000267996 RNF180Q86T96 592 aa17.58■□□□□ 0.4
TPM1-201ENST00000267996 RSPH3Q86UC2 560 aa17.58■□□□□ 0.4
TPM1-201ENST00000267996 RPUSD2Q8IZ73 545 aaKnown RBP17.58■□□□□ 0.4
TPM1-201ENST00000267996 FAXDC2Q96IV6 333 aa17.58■□□□□ 0.4
TPM1-201ENST00000267996 TUBB2BQ9BVA1 445 aa17.58■□□□□ 0.4
TPM1-201ENST00000267996 EIF2AQ9BY44 585 aaKnown RBP17.58■□□□□ 0.4
TPM1-201ENST00000267996 TRPV2Q9Y5S1 764 aa17.58■□□□□ 0.4
TPM1-201ENST00000267996 MRFAP1Q9Y605 127 aa17.58■□□□□ 0.4
TPM1-201ENST00000267996 CAPN6Q9Y6Q1 641 aa17.58■□□□□ 0.4
TPM1-201ENST00000267996 A0A0A6YYK5 440 aaPredicted RBP17.57■□□□□ 0.4
TPM1-201ENST00000267996 CTIFO43310 598 aaKnown RBP17.57■□□□□ 0.4
TPM1-201ENST00000267996 MOCS3O95396 460 aa17.57■□□□□ 0.4
TPM1-201ENST00000267996 AMPD2Q01433 879 aa17.57■□□□□ 0.4
TPM1-201ENST00000267996 FMO1Q01740 532 aa17.57■□□□□ 0.4
TPM1-201ENST00000267996 CDR2Q01850 454 aa17.57■□□□□ 0.4
TPM1-201ENST00000267996 TRPC3Q13507 836 aa17.57■□□□□ 0.4
TPM1-201ENST00000267996 LHX8Q68G74 356 aa17.57■□□□□ 0.4
TPM1-201ENST00000267996 PALB2Q86YC2 1186 aa17.57■□□□□ 0.4
TPM1-201ENST00000267996 C1orf127Q8N9H9 656 aa17.57■□□□□ 0.4
TPM1-201ENST00000267996 WNT8BQ93098 351 aa17.57■□□□□ 0.4
TPM1-201ENST00000267996 NOX5Q96PH1 765 aa17.57■□□□□ 0.4
TPM1-201ENST00000267996 NIF3L1Q9GZT8 377 aa17.57■□□□□ 0.4
TPM1-201ENST00000267996 ISCUQ9H1K1 167 aa17.57■□□□□ 0.4
TPM1-201ENST00000267996 ACP6Q9NPH0 428 aa17.57■□□□□ 0.4
TPM1-201ENST00000267996 DERAQ9Y315 318 aa17.57■□□□□ 0.4
TPM1-201ENST00000267996 HTTP42858 3142 aa17.57■□□□□ 0.4
TPM1-201ENST00000267996 RALGAPA2Q2PPJ7 1873 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 UQCRHLA0A096LP55 91 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 ANO9A1A5B4 782 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 UQCRHP07919 91 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 GZMAP12544 262 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 KRT5P13647 590 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 PDE6CP51160 858 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 GALCP54803 685 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 BPIFB4P59827 614 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 PTPN11Q06124 597 aaPredicted RBP17.56■□□□□ 0.4
TPM1-201ENST00000267996 TMEM132DQ14C87 1099 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 FAM47CQ5HY64 1035 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 UBXN11Q5T124 520 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 PAPD7Q5XG87 772 aaKnown RBP17.56■□□□□ 0.4
TPM1-201ENST00000267996 FAM228AQ86W67 206 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 PCDHB18PQ96TA0 734 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 TSEN34Q9BSV6 310 aaKnown RBP17.56■□□□□ 0.4
TPM1-201ENST00000267996 SENP6Q9GZR1 1112 aaPredicted RBP17.56■□□□□ 0.4
TPM1-201ENST00000267996 VRTNQ9H8Y1 702 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 PCDHB2Q9Y5E7 798 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 CDY2AQ9Y6F7 541 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 PCNTO95613 3336 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 MYH10P35580 1976 aa17.56■□□□□ 0.4
TPM1-201ENST00000267996 SLU7O95391 586 aaKnown RBP17.55■□□□□ 0.4
TPM1-201ENST00000267996 TMEM253P0C7T8 217 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 ZNF132P52740 706 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 ACLYP53396 1101 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 MGAT3Q09327 533 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 ZNF699Q32M78 642 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 ALKAL1Q6UXT8 129 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 ZNF677Q86XU0 584 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 SNX27Q96L92 541 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 HMX1Q9NP08 348 aaPredicted RBP17.55■□□□□ 0.4
TPM1-201ENST00000267996 SNTG2Q9NY99 539 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms