RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 UPF3AQ9H1J1 476 aaKnown RBP22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 HDAC6Q9UBN7 1215 aa22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 GINS2Q9Y248 185 aa22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 SEPT4O43236 478 aa22.09■■□□□ 1.13
LYSMD2-201ENST00000267838 ERLIN1O75477 346 aa22.09■■□□□ 1.13
LYSMD2-201ENST00000267838 TMEM191BP0C7N4 346 aa22.09■■□□□ 1.13
LYSMD2-201ENST00000267838 KRT5P13647 590 aa22.09■■□□□ 1.13
LYSMD2-201ENST00000267838 FGFR4P22455 802 aa22.09■■□□□ 1.13
LYSMD2-201ENST00000267838 NOP14P78316 857 aaKnown RBP22.09■■□□□ 1.13
LYSMD2-201ENST00000267838 ZNF200P98182 395 aaPredicted RBP22.09■■□□□ 1.13
LYSMD2-201ENST00000267838 TFAMQ00059 246 aaKnown RBP22.09■■□□□ 1.13
LYSMD2-201ENST00000267838 POU5F1Q01860 360 aaKnown RBP22.09■■□□□ 1.13
LYSMD2-201ENST00000267838 CACNB2Q08289 660 aaPredicted RBP22.09■■□□□ 1.13
LYSMD2-201ENST00000267838 CUL2Q13617 745 aa22.09■■□□□ 1.13
LYSMD2-201ENST00000267838 GNASQ5JWF2 1037 aa22.09■■□□□ 1.13
LYSMD2-201ENST00000267838 EFCAB13Q8IY85 973 aa22.09■■□□□ 1.13
LYSMD2-201ENST00000267838 C7orf31Q8N865 590 aa22.09■■□□□ 1.13
LYSMD2-201ENST00000267838 MSANTD4Q8NCY6 345 aa22.09■■□□□ 1.13
LYSMD2-201ENST00000267838 IMPG2Q9BZV3 1241 aa22.09■■□□□ 1.13
LYSMD2-201ENST00000267838 ST7Q9NRC1 585 aa22.09■■□□□ 1.13
LYSMD2-201ENST00000267838 MYH10P35580 1976 aa22.09■■□□□ 1.13
LYSMD2-201ENST00000267838 TMCO5BA8MYB1 307 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 CST3P01034 146 aaPredicted RBP22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 TNNC2P02585 160 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 GNAT1P11488 350 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 CYP11B1P15538 503 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 CHRNB2P17787 502 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 HOXC8P31273 242 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 PDE6CP51160 858 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 GALCP54803 685 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 PALB2Q86YC2 1186 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 ANKRD36BP1Q96IX9 119 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 OSMRQ99650 979 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 ADPGKQ9BRR6 497 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 MTG1Q9BT17 334 aaPredicted RBP22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 CFHR5Q9BXR6 569 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 CDHR5Q9HBB8 845 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 SPC25Q9HBM1 224 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 ACP6Q9NPH0 428 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 RNF186Q9NXI6 227 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 NUB1Q9Y5A7 615 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 SAR1BQ9Y6B6 198 aa22.08■■□□□ 1.13
LYSMD2-201ENST00000267838 TRIP12Q14669 1992 aaPredicted RBP22.08■■□□□ 1.12
LYSMD2-201ENST00000267838 CLSTN1O94985 981 aa22.07■■□□□ 1.12
LYSMD2-201ENST00000267838 PGK1P00558 417 aa22.07■■□□□ 1.12
LYSMD2-201ENST00000267838 RARBP10826 455 aa22.07■■□□□ 1.12
LYSMD2-201ENST00000267838 TBXAS1P24557 533 aaPredicted RBP22.07■■□□□ 1.12
LYSMD2-201ENST00000267838 APLP1P51693 650 aa22.07■■□□□ 1.12
LYSMD2-201ENST00000267838 SCARA3Q6AZY7 606 aa22.07■■□□□ 1.12
LYSMD2-201ENST00000267838 RAB21Q9UL25 225 aa22.07■■□□□ 1.12
LYSMD2-201ENST00000267838 PCDHGC5Q9Y5F6 944 aa22.07■■□□□ 1.12
LYSMD2-201ENST00000267838 A0A0A6YYK5 440 aaPredicted RBP22.07■■□□□ 1.12
LYSMD2-201ENST00000267838 LACTBL1A8MY62 500 aa22.07■■□□□ 1.12
LYSMD2-201ENST00000267838 ASS1P00966 412 aaKnown RBP22.07■■□□□ 1.12
LYSMD2-201ENST00000267838 TMEM253P0C7T8 217 aa22.07■■□□□ 1.12
LYSMD2-201ENST00000267838 DARSP14868 501 aaKnown RBP22.07■■□□□ 1.12
LYSMD2-201ENST00000267838 PCBP1Q15365 356 aaKnown RBP eCLIP22.07■■□□□ 1.12
LYSMD2-201ENST00000267838 CATSPER4Q7RTX7 472 aa22.07■■□□□ 1.12
LYSMD2-201ENST00000267838 TAS2R14Q9NYV8 317 aa22.07■■□□□ 1.12
LYSMD2-201ENST00000267838 MEFVO15553 781 aaPredicted RBP22.06■■□□□ 1.12
LYSMD2-201ENST00000267838 PALMO75781 387 aa22.06■■□□□ 1.12
LYSMD2-201ENST00000267838 ACO1P21399 889 aaKnown RBP22.06■■□□□ 1.12
LYSMD2-201ENST00000267838 MYL6P60660 151 aa22.06■■□□□ 1.12
LYSMD2-201ENST00000267838 NKX3-2P78367 333 aa22.06■■□□□ 1.12
LYSMD2-201ENST00000267838 CDR2Q01850 454 aa22.06■■□□□ 1.12
LYSMD2-201ENST00000267838 GPS2Q13227 327 aa22.06■■□□□ 1.12
LYSMD2-201ENST00000267838 TRPC3Q13507 836 aa22.06■■□□□ 1.12
LYSMD2-201ENST00000267838 IFI16Q16666 785 aaKnown RBP22.06■■□□□ 1.12
LYSMD2-201ENST00000267838 SGSM1Q2NKQ1 1148 aa22.06■■□□□ 1.12
LYSMD2-201ENST00000267838 PCDHB18PQ96TA0 734 aa22.06■■□□□ 1.12
LYSMD2-201ENST00000267838 EPC1Q9H2F5 836 aa22.06■■□□□ 1.12
LYSMD2-201ENST00000267838 UMODL1Q5DID0 1318 aa22.06■■□□□ 1.12
LYSMD2-201ENST00000267838 TRPA1O75762 1119 aa22.05■■□□□ 1.12
LYSMD2-201ENST00000267838 SASH3O75995 380 aa22.05■■□□□ 1.12
LYSMD2-201ENST00000267838 MMEP08473 750 aa22.05■■□□□ 1.12
LYSMD2-201ENST00000267838 HOXA11P31270 313 aaPredicted RBP22.05■■□□□ 1.12
LYSMD2-201ENST00000267838 FMO1Q01740 532 aa22.05■■□□□ 1.12
LYSMD2-201ENST00000267838 SMC1AQ14683 1233 aaKnown RBP22.05■■□□□ 1.12
LYSMD2-201ENST00000267838 LONRF2Q1L5Z9 754 aa22.05■■□□□ 1.12
LYSMD2-201ENST00000267838 DCAF4L1Q3SXM0 396 aa22.05■■□□□ 1.12
LYSMD2-201ENST00000267838 DDX1Q92499 740 aaKnown RBP22.05■■□□□ 1.12
LYSMD2-201ENST00000267838 FUT8Q9BYC5 575 aa22.05■■□□□ 1.12
LYSMD2-201ENST00000267838 ASB7Q9H672 318 aa22.05■■□□□ 1.12
LYSMD2-201ENST00000267838 CTAGE15A4D2H0 777 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 ANKRD62A6NC57 917 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 NFICP08651 508 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 CTAGE8P0CG41 777 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 ELNP15502 786 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 EIF4BP23588 611 aaKnown RBP22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 CCND3P30281 292 aaPredicted RBP22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 NOP2P46087 812 aaKnown RBP22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 SLC10A6Q3KNW5 377 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 JADE1Q6IE81 842 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 CXCL17Q6UXB2 119 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 APBB1IPQ7Z5R6 666 aaPredicted RBP22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 CTAGE6Q86UF2 777 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 CTAGE4Q8IX94 777 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 NME8Q8N427 588 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 CTNNBL1Q8WYA6 563 aaPredicted RBP22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 ACAP3Q96P50 834 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms