RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 UBE3AQ05086 875 aa17.83■□□□□ 0.45
SNRPF-201ENST00000266735 TYRO3Q06418 890 aa17.83■□□□□ 0.45
SNRPF-201ENST00000266735 GPM6BQ13491 265 aa17.83■□□□□ 0.45
SNRPF-201ENST00000266735 GRIN2CQ14957 1233 aa17.83■□□□□ 0.45
SNRPF-201ENST00000266735 DUOXA2Q1HG44 320 aa17.83■□□□□ 0.45
SNRPF-201ENST00000266735 DCLRE1AQ6PJP8 1040 aa17.83■□□□□ 0.45
SNRPF-201ENST00000266735 FILIP1Q7Z7B0 1213 aa17.83■□□□□ 0.45
SNRPF-201ENST00000266735 TMEM173Q86WV6 379 aaPredicted RBP17.83■□□□□ 0.45
SNRPF-201ENST00000266735 TMC2Q8TDI7 906 aa17.83■□□□□ 0.45
SNRPF-201ENST00000266735 PARD3BQ8TEW8 1205 aa17.83■□□□□ 0.45
SNRPF-201ENST00000266735 ANKRD36BP1Q96IX9 119 aa17.83■□□□□ 0.45
SNRPF-201ENST00000266735 CGRRF1Q99675 332 aa17.83■□□□□ 0.45
SNRPF-201ENST00000266735 PAAF1Q9BRP4 392 aa17.83■□□□□ 0.45
SNRPF-201ENST00000266735 INTS13Q9NVM9 706 aa17.83■□□□□ 0.45
SNRPF-201ENST00000266735 CACNG4Q9UBN1 327 aa17.83■□□□□ 0.45
SNRPF-201ENST00000266735 PUF60Q9UHX1 559 aaKnown RBP17.83■□□□□ 0.45
SNRPF-201ENST00000266735 EPOPA6NHQ4 379 aa17.82■□□□□ 0.44
SNRPF-201ENST00000266735 B3GAT3O94766 335 aa17.82■□□□□ 0.44
SNRPF-201ENST00000266735 KIF4AO95239 1232 aa17.82■□□□□ 0.44
SNRPF-201ENST00000266735 GNA14O95837 355 aa17.82■□□□□ 0.44
SNRPF-201ENST00000266735 ITGB1P05556 798 aa17.82■□□□□ 0.44
SNRPF-201ENST00000266735 CCDC192P0DO97 292 aa17.82■□□□□ 0.44
SNRPF-201ENST00000266735 VAMP7P51809 220 aa17.82■□□□□ 0.44
SNRPF-201ENST00000266735 AP3M2P53677 418 aa17.82■□□□□ 0.44
SNRPF-201ENST00000266735 CLDN10P78369 228 aa17.82■□□□□ 0.44
SNRPF-201ENST00000266735 BFSP1Q12934 665 aa17.82■□□□□ 0.44
SNRPF-201ENST00000266735 LMAN2LQ9H0V9 348 aa17.82■□□□□ 0.44
SNRPF-201ENST00000266735 GZF1Q9H116 711 aaPredicted RBP17.82■□□□□ 0.44
SNRPF-201ENST00000266735 METTL14Q9HCE5 456 aaKnown RBP17.82■□□□□ 0.44
SNRPF-201ENST00000266735 DPP3Q9NY33 737 aa17.82■□□□□ 0.44
SNRPF-201ENST00000266735 ADAM28Q9UKQ2 775 aa17.82■□□□□ 0.44
SNRPF-201ENST00000266735 LZTS1Q9Y250 596 aa17.82■□□□□ 0.44
SNRPF-201ENST00000266735 FNDC1Q4ZHG4 1894 aaPredicted RBP17.82■□□□□ 0.44
SNRPF-201ENST00000266735 SYCE3A1L190 88 aa17.81■□□□□ 0.44
SNRPF-201ENST00000266735 LRRIQ3A6PVS8 624 aaPredicted RBP17.81■□□□□ 0.44
SNRPF-201ENST00000266735 TADA2AO75478 443 aa17.81■□□□□ 0.44
SNRPF-201ENST00000266735 TNNC2P02585 160 aa17.81■□□□□ 0.44
SNRPF-201ENST00000266735 ZSCAN23Q3MJ62 389 aa17.81■□□□□ 0.44
SNRPF-201ENST00000266735 SPPL3Q8TCT6 385 aa17.81■□□□□ 0.44
SNRPF-201ENST00000266735 PLEKHO2Q8TD55 490 aa17.81■□□□□ 0.44
SNRPF-201ENST00000266735 BCL7CQ8WUZ0 217 aaPredicted RBP17.81■□□□□ 0.44
SNRPF-201ENST00000266735 RABGGTAQ92696 567 aa17.81■□□□□ 0.44
SNRPF-201ENST00000266735 BORCS6Q96GS4 357 aa17.81■□□□□ 0.44
SNRPF-201ENST00000266735 FAM161BQ96MY7 647 aa17.81■□□□□ 0.44
SNRPF-201ENST00000266735 MED15Q96RN5 788 aa17.81■□□□□ 0.44
SNRPF-201ENST00000266735 POP1Q99575 1024 aaKnown RBP17.81■□□□□ 0.44
SNRPF-201ENST00000266735 SRRTQ9BXP5 876 aaKnown RBP17.81■□□□□ 0.44
SNRPF-201ENST00000266735 MTMR12Q9C0I1 747 aa17.81■□□□□ 0.44
SNRPF-201ENST00000266735 PRDM12Q9H4Q4 367 aa17.81■□□□□ 0.44
SNRPF-201ENST00000266735 ALG13Q9NP73 1137 aaKnown RBP17.81■□□□□ 0.44
SNRPF-201ENST00000266735 ITGA11Q9UKX5 1188 aa17.81■□□□□ 0.44
SNRPF-201ENST00000266735 PTPRJQ12913 1337 aa17.81■□□□□ 0.44
SNRPF-201ENST00000266735 TRIOBPQ9H2D6 2365 aa17.81■□□□□ 0.44
SNRPF-201ENST00000266735 IKBKBO14920 756 aa17.8■□□□□ 0.44
SNRPF-201ENST00000266735 PAX3P23760 479 aa17.8■□□□□ 0.44
SNRPF-201ENST00000266735 GUCY2FP51841 1108 aa17.8■□□□□ 0.44
SNRPF-201ENST00000266735 MCCD1P59942 119 aaPredicted RBP17.8■□□□□ 0.44
SNRPF-201ENST00000266735 TPD52L1Q16890 204 aaPredicted RBP17.8■□□□□ 0.44
SNRPF-201ENST00000266735 C9orf57Q5W0N0 161 aa17.8■□□□□ 0.44
SNRPF-201ENST00000266735 LMBRD2Q68DH5 695 aaPredicted RBP17.8■□□□□ 0.44
SNRPF-201ENST00000266735 FRMD5Q7Z6J6 570 aa17.8■□□□□ 0.44
SNRPF-201ENST00000266735 DDX53Q86TM3 631 aaKnown RBP17.8■□□□□ 0.44
SNRPF-201ENST00000266735 DEFB123Q8N688 67 aa17.8■□□□□ 0.44
SNRPF-201ENST00000266735 C1orf127Q8N9H9 656 aa17.8■□□□□ 0.44
SNRPF-201ENST00000266735 OR5B17Q8NGF7 314 aa17.8■□□□□ 0.44
SNRPF-201ENST00000266735 ENOX1Q8TC92 643 aaKnown RBP17.8■□□□□ 0.44
SNRPF-201ENST00000266735 GDPD5Q8WTR4 605 aa17.8■□□□□ 0.44
SNRPF-201ENST00000266735 POF1BQ8WVV4 589 aa17.8■□□□□ 0.44
SNRPF-201ENST00000266735 NAT10Q9H0A0 1025 aaKnown RBP17.8■□□□□ 0.44
SNRPF-201ENST00000266735 ARMCX3Q9UH62 379 aaPredicted RBP17.8■□□□□ 0.44
SNRPF-201ENST00000266735 NUB1Q9Y5A7 615 aa17.8■□□□□ 0.44
SNRPF-201ENST00000266735 SF3B1O75533 1304 aaKnown RBP eCLIP17.8■□□□□ 0.44
SNRPF-201ENST00000266735 ANO9A1A5B4 782 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 F8W810 466 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 RFXAPO00287 272 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 PIRO00625 290 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 GRM6O15303 877 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 TRAPPC3O43617 180 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 LPXNO60711 386 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 DLG4P78352 724 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 ELAVL2Q12926 359 aaKnown RBP17.79■□□□□ 0.44
SNRPF-201ENST00000266735 PTPROQ16827 1216 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 CCDC40Q4G0X9 1142 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 FUT10Q6P4F1 479 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 C11orf57Q6ZUT1 292 aaPredicted RBP17.79■□□□□ 0.44
SNRPF-201ENST00000266735 Q7L0L9 218 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 C3orf58Q8NDZ4 430 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 HASPINQ8TF76 798 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 FUCA2Q9BTY2 467 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 DNAJC25Q9H1X3 360 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 R3HCC1Q9Y3T6 440 aaKnown RBP17.79■□□□□ 0.44
SNRPF-201ENST00000266735 STX10O60499 249 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 EFEMP2O95967 443 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 ITGB3P05106 788 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 PNPLA4P41247 253 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 MARSP56192 900 aaKnown RBP17.79■□□□□ 0.44
SNRPF-201ENST00000266735 RBP5P82980 135 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 TRAPPC11Q7Z392 1133 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 RNF168Q8IYW5 571 aaPredicted RBP17.79■□□□□ 0.44
SNRPF-201ENST00000266735 LRRC52Q8N7C0 313 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms