RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 CPA5Q8WXQ8 436 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 ZBTB45Q96K62 511 aaPredicted RBP13.79□□□□□ -0.2
CPSF6-201ENST00000266679 TRIM7Q9C029 511 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 ANKFY1Q9P2R3 1169 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 PCYOX1Q9UHG3 505 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 AGO2Q9UKV8 859 aaKnown RBP13.79□□□□□ -0.2
CPSF6-201ENST00000266679 MTUS1Q9ULD2 1270 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 ZC3H11AO75152 810 aaKnown RBP eCLIP13.79□□□□□ -0.2
CPSF6-201ENST00000266679 RARAP10276 462 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 MAPK4P31152 587 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 SSTR3P32745 418 aaPredicted RBP13.79□□□□□ -0.2
CPSF6-201ENST00000266679 COILP38432 576 aaPredicted RBP13.79□□□□□ -0.2
CPSF6-201ENST00000266679 PMS2P54278 862 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 CORO7P57737 925 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 STXBP2Q15833 593 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 C2CD6Q53TS8 623 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 WDR44Q5JSH3 913 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 ZBTB41Q5SVQ8 909 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 ARMC9Q7Z3E5 817 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 CCDC105Q8IYK2 499 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 ARFGAP2Q8N6H7 521 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 PSPC1Q8WXF1 523 aaKnown RBP13.79□□□□□ -0.2
CPSF6-201ENST00000266679 HAPLN2Q9GZV7 340 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 EPN3Q9H201 632 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 RASSF4Q9H2L5 321 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 DCDC2CA8MYV0 355 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 CLDN3O15551 220 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 SHBGP04278 402 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 HARSP12081 509 aaKnown RBP13.78□□□□□ -0.2
CPSF6-201ENST00000266679 GLRA2P23416 452 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 KCNJ1P48048 391 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 ENPEPQ07075 957 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 SIX1Q15475 284 aaPredicted RBP13.78□□□□□ -0.2
CPSF6-201ENST00000266679 MCOLN2Q8IZK6 566 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 TSPYL1Q9H0U9 437 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 EPB41L4BQ9H329 900 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 MROH7Q68CQ1 1323 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 TNRC18O15417 2968 aaPredicted RBP13.78□□□□□ -0.2
CPSF6-201ENST00000266679 PTPRFP10586 1907 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 VNN1O95497 513 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 C4BPAP04003 597 aaKnown RBP13.78□□□□□ -0.2
CPSF6-201ENST00000266679 EDN1P05305 212 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 UNGP13051 313 aaPredicted RBP13.78□□□□□ -0.2
CPSF6-201ENST00000266679 RRM1P23921 792 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 SEC24CP53992 1094 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 MAGOHP61326 146 aaKnown RBP13.78□□□□□ -0.2
CPSF6-201ENST00000266679 MKRN4PQ13434 485 aaPredicted RBP13.78□□□□□ -0.2
CPSF6-201ENST00000266679 ZACNQ401N2 412 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 PASD1Q8IV76 773 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 ANKRD35Q8N283 1001 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 MSTO1Q9BUK6 570 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 MCOLN1Q9GZU1 580 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 PORCNQ9H237 461 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 KIAA1586Q9HCI6 787 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 RBAKQ9NYW8 714 aaPredicted RBP13.78□□□□□ -0.2
CPSF6-201ENST00000266679 AFG3L2Q9Y4W6 797 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 FAM169AQ9Y6X4 670 aa13.78□□□□□ -0.2
CPSF6-201ENST00000266679 MYPNQ86TC9 1320 aa13.77□□□□□ -0.2
CPSF6-201ENST00000266679 DRG2P55039 364 aaKnown RBP13.77□□□□□ -0.21
CPSF6-201ENST00000266679 PPP2R2AP63151 447 aa13.77□□□□□ -0.21
CPSF6-201ENST00000266679 CYP1B1Q16678 543 aa13.77□□□□□ -0.21
CPSF6-201ENST00000266679 UBAP2Q5T6F2 1119 aaKnown RBP13.77□□□□□ -0.21
CPSF6-201ENST00000266679 DENND2CQ68D51 928 aa13.77□□□□□ -0.21
CPSF6-201ENST00000266679 CRELD2Q6UXH1 353 aaPredicted RBP13.77□□□□□ -0.21
CPSF6-201ENST00000266679 NLRP14Q86W24 1093 aa13.77□□□□□ -0.21
CPSF6-201ENST00000266679 EFCAB13Q8IY85 973 aa13.77□□□□□ -0.21
CPSF6-201ENST00000266679 ZNF473Q8WTR7 871 aaKnown RBP13.77□□□□□ -0.21
CPSF6-201ENST00000266679 C1orf54Q8WWF1 131 aa13.77□□□□□ -0.21
CPSF6-201ENST00000266679 TARS2Q9BW92 718 aaKnown RBP13.77□□□□□ -0.21
CPSF6-201ENST00000266679 FAM107BQ9H098 131 aa13.77□□□□□ -0.21
CPSF6-201ENST00000266679 PPANQ9NQ55 473 aaKnown RBP13.77□□□□□ -0.21
CPSF6-201ENST00000266679 HOXC10Q9NYD6 342 aa13.77□□□□□ -0.21
CPSF6-201ENST00000266679 PCDHB4Q9Y5E5 795 aa13.77□□□□□ -0.21
CPSF6-201ENST00000266679 MAFBQ9Y5Q3 323 aaPredicted RBP13.77□□□□□ -0.21
CPSF6-201ENST00000266679 E7EVH7 732 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 K7ERI5 159 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 PODXLO00592 558 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 CFHP08603 1231 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 SCP2P22307 547 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 TMOD1P28289 359 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 ABCD1P33897 745 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 NAMPTP43490 491 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 NSFP46459 744 aaKnown RBP13.76□□□□□ -0.21
CPSF6-201ENST00000266679 ALDH5A1P51649 535 aaPredicted RBP13.76□□□□□ -0.21
CPSF6-201ENST00000266679 CLDN10P78369 228 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 SEZ6Q53EL9 994 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 SPDYCQ5MJ68 293 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 TREML2Q5T2D2 321 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 LDLRAD1Q5T700 205 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 RNF25Q96BH1 459 aaPredicted RBP13.76□□□□□ -0.21
CPSF6-201ENST00000266679 FAM81BQ96LP2 452 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 DHX33Q9H6R0 707 aaKnown RBP13.76□□□□□ -0.21
CPSF6-201ENST00000266679 APOBEC3GQ9HC16 384 aaKnown RBP13.76□□□□□ -0.21
CPSF6-201ENST00000266679 MTRF1LQ9UGC7 380 aaKnown RBP13.76□□□□□ -0.21
CPSF6-201ENST00000266679 SLC12A6Q9UHW9 1150 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 PCDHB2Q9Y5E7 798 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 UMODL1Q5DID0 1318 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 SMIM23A6NLE4 172 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 CAND2O75155 1236 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 UBA1P22314 1058 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms