RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 C1orf228Q6PIY5 440 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 P2RX7Q99572 595 aaKnown RBP16.28■□□□□ 0.2
TIMP3-201ENST00000266085 AGO4Q9HCK5 861 aaKnown RBP16.28■□□□□ 0.2
TIMP3-201ENST00000266085 TXLNGQ9NUQ3 528 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 FBXL5Q9UKA1 691 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 TTI1O43156 1089 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 NPTXRO95502 500 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 KLRC1P26715 233 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 ARSEP51690 589 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 ITPRIPL1Q6GPH6 555 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 C4orf19Q8IY42 314 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 MAML1Q92585 1016 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 TUBB6Q9BUF5 446 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 AP1B1Q10567 949 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 PGM5Q15124 567 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 EPM2AIP1Q7L775 607 aaPredicted RBP16.28■□□□□ 0.2
TIMP3-201ENST00000266085 LRP10Q7Z4F1 713 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.28■□□□□ 0.27e-7■■■■■ 51.6
TIMP3-201ENST00000266085 MS4A14Q96JA4 679 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 VEPH1Q14D04 833 aa16.27■□□□□ 0.2
TIMP3-201ENST00000266085 CRY2Q49AN0 593 aa16.27■□□□□ 0.2
TIMP3-201ENST00000266085 SCFD1Q8WVM8 642 aa16.27■□□□□ 0.2
TIMP3-201ENST00000266085 HPDLQ96IR7 371 aa16.27■□□□□ 0.2
TIMP3-201ENST00000266085 MAGEB5Q9BZ81 275 aa16.27■□□□□ 0.2
TIMP3-201ENST00000266085 SEMA6BQ9H3T3 888 aa16.27■□□□□ 0.2
TIMP3-201ENST00000266085 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.27■□□□□ 0.2
TIMP3-201ENST00000266085 TERF2Q15554 542 aa16.27■□□□□ 0.2
TIMP3-201ENST00000266085 FAM117BQ6P1L5 589 aa16.27■□□□□ 0.2
TIMP3-201ENST00000266085 FAM47EQ6ZV65 393 aa16.27■□□□□ 0.2
TIMP3-201ENST00000266085 ZNF720Q7Z2F6 126 aa16.27■□□□□ 0.2
TIMP3-201ENST00000266085 CRLF3Q8IUI8 442 aa16.27■□□□□ 0.2
TIMP3-201ENST00000266085 SPATA2LQ8IUW3 424 aaPredicted RBP16.27■□□□□ 0.2
TIMP3-201ENST00000266085 RCOR2Q8IZ40 523 aa16.27■□□□□ 0.2
TIMP3-201ENST00000266085 TMEM117Q9H0C3 514 aa16.27■□□□□ 0.2
TIMP3-201ENST00000266085 GRAP2O75791 330 aa16.27■□□□□ 0.19
TIMP3-201ENST00000266085 GRIK1P39086 918 aa16.27■□□□□ 0.19
TIMP3-201ENST00000266085 NAMPTP43490 491 aa16.27■□□□□ 0.19
TIMP3-201ENST00000266085 EIF3EP60228 445 aaKnown RBP16.27■□□□□ 0.19
TIMP3-201ENST00000266085 KIAA1755Q5JYT7 1200 aa16.27■□□□□ 0.19
TIMP3-201ENST00000266085 TRIM65Q6PJ69 517 aa16.27■□□□□ 0.19
TIMP3-201ENST00000266085 METTL7BQ6UX53 244 aa16.27■□□□□ 0.19
TIMP3-201ENST00000266085 PID1Q7Z2X4 250 aa16.27■□□□□ 0.19
TIMP3-201ENST00000266085 GBP7Q8N8V2 638 aaPredicted RBP16.27■□□□□ 0.19
TIMP3-201ENST00000266085 TRIM55Q9BYV6 548 aa16.27■□□□□ 0.19
TIMP3-201ENST00000266085 SIGLEC1Q9BZZ2 1709 aa16.27■□□□□ 0.19
TIMP3-201ENST00000266085 PIGHQ14442 188 aaPredicted RBP16.26■□□□□ 0.19
TIMP3-201ENST00000266085 SNCBQ16143 134 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 GPAT2Q6NUI2 795 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 ELMOD1Q8N336 334 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 CEP120Q8N960 986 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 SCG3Q8WXD2 468 aaKnown RBP16.26■□□□□ 0.19
TIMP3-201ENST00000266085 LRGUKQ96M69 825 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 ZCCHC17Q9NP64 241 aaKnown RBP16.26■□□□□ 0.19
TIMP3-201ENST00000266085 SLC38A7Q9NVC3 462 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 F8W8V4 182 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 MAPK13O15264 365 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 ESRRAP11474 423 aaPredicted RBP16.26■□□□□ 0.19
TIMP3-201ENST00000266085 HSD17B4P51659 736 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 KIZQ2M2Z5 673 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 ZNF484Q5JVG2 852 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 RNF180Q86T96 592 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 DNERQ8NFT8 737 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 MCEEQ96PE7 176 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 EPAS1Q99814 870 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 VPS11Q9H270 941 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 VCX3AQ9NNX9 186 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.26■□□□□ 0.19
TIMP3-201ENST00000266085 ALG6Q9Y672 507 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 ITGB3P05106 788 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 GTF2H1P32780 548 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 PPP2R2AP63151 447 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 GLRA4Q5JXX5 417 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 RNF219Q5W0B1 726 aaPredicted RBP16.26■□□□□ 0.19
TIMP3-201ENST00000266085 ILDR1Q86SU0 546 aaPredicted RBP16.26■□□□□ 0.19
TIMP3-201ENST00000266085 IFT43Q96FT9 208 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 FHDC1Q9C0D6 1143 aaPredicted RBP16.26■□□□□ 0.19
TIMP3-201ENST00000266085 G3BP2Q9UN86 482 aaKnown RBP16.26■□□□□ 0.19
TIMP3-201ENST00000266085 APOL1O14791 398 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 ATMINO43313 823 aaPredicted RBP16.26■□□□□ 0.19
TIMP3-201ENST00000266085 ZWINTO95229 277 aa16.26■□□□□ 0.19
TIMP3-201ENST00000266085 HIBCHQ6NVY1 386 aaPredicted RBP16.26■□□□□ 0.19
TIMP3-201ENST00000266085 ACTR5Q9H9F9 607 aaPredicted RBP16.26■□□□□ 0.19
TIMP3-201ENST00000266085 PDHXO00330 501 aa16.25■□□□□ 0.19
TIMP3-201ENST00000266085 HSPA4LO95757 839 aa16.25■□□□□ 0.19
TIMP3-201ENST00000266085 TTC4O95801 387 aa16.25■□□□□ 0.19
TIMP3-201ENST00000266085 NCF2P19878 526 aaPredicted RBP16.25■□□□□ 0.19
TIMP3-201ENST00000266085 ZNF677Q86XU0 584 aa16.25■□□□□ 0.19
TIMP3-201ENST00000266085 RUBCNQ92622 972 aa16.25■□□□□ 0.19
TIMP3-201ENST00000266085 KLK14Q9P0G3 267 aa16.25■□□□□ 0.19
TIMP3-201ENST00000266085 EPS15L1Q9UBC2 864 aa16.25■□□□□ 0.19
TIMP3-201ENST00000266085 CHORDC1Q9UHD1 332 aaPredicted RBP16.25■□□□□ 0.19
TIMP3-201ENST00000266085 FOXN3O00409 490 aaPredicted RBP16.25■□□□□ 0.19
TIMP3-201ENST00000266085 PPP1R12AO14974 1030 aaPredicted RBP16.25■□□□□ 0.19
TIMP3-201ENST00000266085 CTIFO43310 598 aaKnown RBP16.25■□□□□ 0.19
TIMP3-201ENST00000266085 PLEKP08567 350 aaPredicted RBP16.25■□□□□ 0.19
TIMP3-201ENST00000266085 CNTN2Q02246 1040 aa16.25■□□□□ 0.19
TIMP3-201ENST00000266085 HIF1AQ16665 826 aa16.25■□□□□ 0.19
TIMP3-201ENST00000266085 TRIM68Q6AZZ1 485 aa16.25■□□□□ 0.19
TIMP3-201ENST00000266085 TRIM67Q6ZTA4 783 aa16.25■□□□□ 0.19
TIMP3-201ENST00000266085 ASCC2Q9H1I8 757 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms