RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 PSPC1Q8WXF1 523 aaKnown RBP6□□□□□ -1.45
VCAN-201ENST00000265077 RXFP1Q9HBX9 757 aa6□□□□□ -1.45
VCAN-201ENST00000265077 GDAQ9Y2T3 454 aa6□□□□□ -1.45
VCAN-201ENST00000265077 PSMD14O00487 310 aa6□□□□□ -1.45
VCAN-201ENST00000265077 SHOX2O60902 331 aaPredicted RBP6□□□□□ -1.45
VCAN-201ENST00000265077 RALGDSQ12967 914 aa6□□□□□ -1.45
VCAN-201ENST00000265077 NAALADL2Q58DX5 795 aa6□□□□□ -1.45
VCAN-201ENST00000265077 LPCAT2Q7L5N7 544 aa6□□□□□ -1.45
VCAN-201ENST00000265077 KCNB2Q92953 911 aa6□□□□□ -1.45
VCAN-201ENST00000265077 MTBPQ96DY7 904 aa6□□□□□ -1.45
VCAN-201ENST00000265077 CCSER1Q9C0I3 900 aa6□□□□□ -1.45
VCAN-201ENST00000265077 DDX56Q9NY93 547 aaKnown RBP6□□□□□ -1.45
VCAN-201ENST00000265077 SPEF1Q9Y4P9 236 aa6□□□□□ -1.45
VCAN-201ENST00000265077 WFS1O76024 890 aa6□□□□□ -1.45
VCAN-201ENST00000265077 LRPAP1P30533 357 aa6□□□□□ -1.45
VCAN-201ENST00000265077 PTPN12Q05209 780 aaKnown RBP6□□□□□ -1.45
VCAN-201ENST00000265077 LRRC41Q15345 812 aa6□□□□□ -1.45
VCAN-201ENST00000265077 LRRC36Q1X8D7 754 aa6□□□□□ -1.45
VCAN-201ENST00000265077 HEATR4Q86WZ0 1026 aa6□□□□□ -1.45
VCAN-201ENST00000265077 FBXL13Q8NEE6 735 aa6□□□□□ -1.45
VCAN-201ENST00000265077 CAVIN3Q969G5 261 aa6□□□□□ -1.45
VCAN-201ENST00000265077 CNBD2Q96M20 576 aa6□□□□□ -1.45
VCAN-201ENST00000265077 ARHGAP26Q9UNA1 814 aa6□□□□□ -1.45
VCAN-201ENST00000265077 ANKRD26Q9UPS8 1709 aa6□□□□□ -1.45
VCAN-201ENST00000265077 SLC34A1Q06495 639 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 EIF2B5Q13144 721 aaKnown RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 TAS2R42Q7RTR8 314 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 RASGRP4Q8TDF6 673 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 SLC26A7Q8TE54 656 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 GIPC3Q8TF64 312 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 ATP6V1E2Q96A05 226 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 SMG5Q9UPR3 1016 aaKnown RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 HEG1Q9ULI3 1381 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 AREL1O15033 823 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 BAIAP3O94812 1187 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 SLC1A1P43005 524 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 ITGA9Q13797 1035 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 LPIN1Q14693 890 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 AIFM3Q96NN9 605 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 CALN1Q9BXU9 219 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 ADAM22Q9P0K1 906 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 ABCA1O95477 2261 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 KPNA7A9QM74 516 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 TRAPPC3O43617 180 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 CLASP2O75122 1294 aaKnown RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 PROSER3Q2NL68 480 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 RFFLQ8WZ73 363 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 PRCCQ92733 491 aaPredicted RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 PUS7LQ9H0K6 701 aaKnown RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 ASNSD1Q9NWL6 643 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 STX18Q9P2W9 335 aaKnown RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 LRRC53A6NM62 1247 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 MFN2O95140 757 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 PSAPP07602 524 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 RAB15P59190 212 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 MORF4L2Q15014 288 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 FRMD5Q7Z6J6 570 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 FAM160B2Q86V87 743 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 IRX2Q9BZI1 471 aaPredicted RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 LRRC4Q9HBW1 653 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 IP6K2Q9UHH9 426 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 IDH3BO43837 385 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 ZNF18P17022 549 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 IL10P22301 178 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 IFNA8P32881 189 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 ACADVLP49748 655 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 TFDP2Q14188 446 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 KNOP1Q1ED39 458 aaKnown RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 TMTC4Q5T4D3 741 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 ZNF564Q8TBZ8 553 aaPredicted RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 TTC17Q96AE7 1141 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 TUBGCP5Q96RT8 1024 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 KLHL4Q9C0H6 718 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 SUN2Q9UH99 717 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 TARSP26639 723 aaKnown RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 THOC5Q13769 683 aaKnown RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 LRRC34Q8IZ02 419 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 TOR1AIP2Q8NFQ8 470 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 TRIM39Q9HCM9 518 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 HEATR1Q9H583 2144 aaKnown RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 SPDYE16A6NNV3 312 aaPredicted RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 CDH16O75309 829 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 MAPRE2Q15555 327 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 SPDYE2Q495Y8 402 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 CCDC137Q6PK04 289 aaKnown RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 ANKRD13AQ8IZ07 590 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 RMDN1Q96DB5 314 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 ACAP3Q96P50 834 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 WWP1Q9H0M0 922 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 CYLDQ9NQC7 956 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 LMCD1Q9NZU5 365 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 LIMA1Q9UHB6 759 aaKnown RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 RPS6KL1Q9Y6S9 549 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 H0Y626 953 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 VAV1P15498 845 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 ATP2C1P98194 919 aaPredicted RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 NR1I3Q14994 352 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 SYDE2Q5VT97 1194 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 B3GALT6Q96L58 329 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 NLRP4Q96MN2 994 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms