RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 TEX28O15482 410 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 EXTL3O43909 919 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 LDHAP00338 332 aaKnown RBP9.15□□□□□ -0.94
ERCC8-201ENST00000265038 NFICP08651 508 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 FGFR3P22607 806 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 LRPAP1P30533 357 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 PSMD2Q13200 908 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 CLUL1Q15846 466 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 FAM171A1Q5VUB5 890 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 SPATA1Q5VX52 437 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 KIAA1841Q6NSI8 718 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 ARMCX5Q6P1M9 558 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 PRSS55Q6UWB4 352 aaPredicted RBP9.15□□□□□ -0.94
ERCC8-201ENST00000265038 GPR65Q8IYL9 337 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 RIN2Q8WYP3 895 aaPredicted RBP9.15□□□□□ -0.94
ERCC8-201ENST00000265038 TSPAN18Q96SJ8 248 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 TTPALQ9BTX7 342 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 EMILIN2Q9BXX0 1053 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 ASB7Q9H672 318 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 AGPAT3Q9NRZ7 376 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 SSX2IPQ9Y2D8 614 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 UBE4BO95155 1302 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 FSD2A1L4K1 749 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 GRXCR2A6NFK2 248 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 CLIC2O15247 247 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 RHOBTB3O94955 611 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 IL9P15248 144 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 EPCAMP16422 314 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 KLRC2P26717 231 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 CLCN4P51793 760 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 FAM160A1Q05DH4 1040 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 ELAVL2Q12926 359 aaKnown RBP9.15□□□□□ -0.94
ERCC8-201ENST00000265038 KNOP1Q1ED39 458 aaKnown RBP9.15□□□□□ -0.94
ERCC8-201ENST00000265038 PTCRAQ6ISU1 281 aaPredicted RBP9.15□□□□□ -0.94
ERCC8-201ENST00000265038 ANKRD54Q6NXT1 300 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 KANK3Q6NY19 840 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 SYCE2Q6PIF2 218 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 CEP57Q86XR8 500 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 BRSK2Q8IWQ3 736 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 GPD1LQ8N335 351 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 TMEM87AQ8NBN3 555 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 LNX1Q8TBB1 728 aaPredicted RBP9.15□□□□□ -0.94
ERCC8-201ENST00000265038 PIK3R5Q8WYR1 880 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 COL25A1Q9BXS0 654 aaPredicted RBP9.15□□□□□ -0.94
ERCC8-201ENST00000265038 S1PR5Q9H228 398 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 CD207Q9UJ71 328 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 DERAQ9Y315 318 aa9.15□□□□□ -0.94
ERCC8-201ENST00000265038 PLXNA4Q9HCM2 1894 aa9.15□□□□□ -0.95
ERCC8-201ENST00000265038 PPEF2O14830 753 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 KIAA0391O15091 583 aaKnown RBP9.14□□□□□ -0.95
ERCC8-201ENST00000265038 MBTPS2O43462 519 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 RPL17P18621 184 aaKnown RBP9.14□□□□□ -0.95
ERCC8-201ENST00000265038 TKTP29401 623 aaKnown RBP9.14□□□□□ -0.95
ERCC8-201ENST00000265038 SNRPFP62306 86 aaKnown RBP9.14□□□□□ -0.95
ERCC8-201ENST00000265038 PNOCQ13519 176 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 KCNB1Q14721 858 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 TMEM132DQ14C87 1099 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 PUS10Q3MIT2 529 aaKnown RBP9.14□□□□□ -0.95
ERCC8-201ENST00000265038 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.14□□□□□ -0.95
ERCC8-201ENST00000265038 PPFIBP1Q86W92 1011 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 CBWD2Q8IUF1 395 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 EFCAB13Q8IY85 973 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 SMRP1Q8NCR6 262 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 BEST2Q8NFU1 509 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 CASP10Q92851 521 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 FBXL18Q96ME1 805 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 TIGD1Q96MW7 591 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 HSPBP1Q9NZL4 362 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 FNIP2Q9P278 1114 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 C2CD2Q9Y426 696 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 ANO9A1A5B4 782 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 PIRO00625 290 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 ADAM12O43184 909 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 XPOTO43592 962 aaKnown RBP9.14□□□□□ -0.95
ERCC8-201ENST00000265038 TRAPPC3O43617 180 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 IL18RAPO95256 599 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 AARSP49588 968 aaKnown RBP eCLIP9.14□□□□□ -0.95
ERCC8-201ENST00000265038 SMAD4Q13485 552 aaKnown RBP9.14□□□□□ -0.95
ERCC8-201ENST00000265038 C9orf57Q5W0N0 161 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 SCARA3Q6AZY7 606 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 RSPO2Q6UXX9 243 aaPredicted RBP9.14□□□□□ -0.95
ERCC8-201ENST00000265038 C12orf56Q8IXR9 622 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 FEZF2Q8TBJ5 459 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 NOC3LQ8WTT2 800 aaKnown RBP9.14□□□□□ -0.95
ERCC8-201ENST00000265038 FAM84AQ96KN4 292 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 SUSD3Q96L08 255 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 NECAB3Q96P71 396 aaPredicted RBP9.14□□□□□ -0.95
ERCC8-201ENST00000265038 CLSTN3Q9BQT9 956 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 APOL5Q9BWW9 433 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 KCTD10Q9H3F6 313 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 PDE11AQ9HCR9 933 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 TSHZ2Q9NRE2 1034 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.14□□□□□ -0.95
ERCC8-201ENST00000265038 RBAKQ9NYW8 714 aaPredicted RBP9.14□□□□□ -0.95
ERCC8-201ENST00000265038 NUB1Q9Y5A7 615 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.14□□□□□ -0.95
ERCC8-201ENST00000265038 MYO7AQ13402 2215 aa9.14□□□□□ -0.95
ERCC8-201ENST00000265038 SPTLC1O15269 473 aa9.13□□□□□ -0.95
ERCC8-201ENST00000265038 ADH1AP07327 375 aa9.13□□□□□ -0.95
ERCC8-201ENST00000265038 MCM4P33991 863 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms