RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 WDR64B1ANS9 1081 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 DRD4P21917 467 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 USH1GQ495M9 461 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 NALCNQ8IZF0 1738 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 PPP1R2P1Q96PQ5 205 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 SLC9A2Q9UBY0 812 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 ZC3H11AO75152 810 aaKnown RBP eCLIP12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 ZNF200P98182 395 aaPredicted RBP12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 CCNJLQ8IV13 435 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 KLHL23Q8NBE8 558 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 AGAP11Q8TF27 550 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 TLR3O15455 904 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 FCGR1AP12314 374 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 ATP2B4P23634 1241 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 CA8P35219 290 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 BTDP43251 543 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 TRIM16LQ309B1 348 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 ZNF507Q8TCN5 953 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 SCYL1Q96KG9 808 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 CDC42EP4Q9H3Q1 356 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 NID2Q14112 1375 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 STKLD1Q8NE28 680 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 EPS8L3Q8TE67 593 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 ITFG2Q969R8 447 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 THTPAQ9BU02 230 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 PALMDQ9NP74 551 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 ASNSD1Q9NWL6 643 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 ITGA8P53708 1063 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 GRM1Q13255 1194 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 PPIL6Q8IXY8 311 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 SRBD1Q8N5C6 995 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 WARS2Q9UGM6 360 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 ZBTB24O43167 697 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 GOLGA8HP0CJ92 632 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 GRK2P25098 689 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 ACVR2BQ13705 512 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 OLFML2BQ68BL8 750 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 NEDD1Q8NHV4 660 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 SCFD1Q8WVM8 642 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 MAGED4Q96JG8 741 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 PCDHB2Q9Y5E7 798 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 TRPC4APQ8TEL6 797 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 FAM8A1Q9UBU6 413 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 ZBTB21Q9ULJ3 1066 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 L3MBTL1Q9Y468 752 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 CITO14578 2027 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 SORBS3O60504 671 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 LTKP29376 864 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 SFNP31947 248 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 RPL5P46777 297 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 OCRLQ01968 901 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 DNAJC3Q13217 504 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 ZNF211Q13398 564 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 B3GNT6Q6ZMB0 384 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 CDKL3Q8IVW4 592 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 TRPC5Q9UL62 973 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 RIPK2O43353 540 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 FLOT2Q14254 428 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 FAR2Q96K12 515 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 SLC5A4Q9NY91 659 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 MYH14Q7Z406 1995 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 KANSL1LA0AUZ9 987 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 BMP6P22004 513 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 STX3Q13277 289 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 SGSM1Q2NKQ1 1148 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 TTC39BQ5VTQ0 682 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 GPR141Q7Z602 305 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 PATL1Q86TB9 770 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 PRPF39Q86UA1 669 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 FOXP4Q8IVH2 680 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 TRPV6Q9H1D0 765 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 C8orf4Q9NR00 106 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 TBC1D22BQ9NU19 505 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 ATAD3AQ9NVI7 634 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 NSMCE4AQ9NXX6 385 aa12.28□□□□□ -0.44
DNMT3A-201ENST00000264709 NRDE2Q9H7Z3 1164 aa12.27□□□□□ -0.44
DNMT3A-201ENST00000264709 KCNK4Q9NYG8 393 aa12.27□□□□□ -0.44
DNMT3A-201ENST00000264709 ROR1Q01973 937 aa12.27□□□□□ -0.44
DNMT3A-201ENST00000264709 CEP55Q53EZ4 464 aa12.27□□□□□ -0.44
DNMT3A-201ENST00000264709 SPOPLQ6IQ16 392 aa12.27□□□□□ -0.44
DNMT3A-201ENST00000264709 EXD1Q8NHP7 514 aa12.27□□□□□ -0.44
DNMT3A-201ENST00000264709 KRT35Q92764 455 aa12.27□□□□□ -0.44
DNMT3A-201ENST00000264709 EML4Q9HC35 981 aaKnown RBP12.27□□□□□ -0.44
DNMT3A-201ENST00000264709 CLIC2O15247 247 aa12.27□□□□□ -0.44
DNMT3A-201ENST00000264709 PAMP19021 973 aa12.27□□□□□ -0.44
DNMT3A-201ENST00000264709 IZUMO2Q6UXV1 221 aa12.27□□□□□ -0.44
DNMT3A-201ENST00000264709 DDX42Q86XP3 938 aaKnown RBP eCLIP12.27□□□□□ -0.44
DNMT3A-201ENST00000264709 LRRC43Q8N309 656 aa12.27□□□□□ -0.44
DNMT3A-201ENST00000264709 TMEM237Q96Q45 408 aa12.27□□□□□ -0.44
DNMT3A-201ENST00000264709 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.27□□□□□ -0.44
DNMT3A-201ENST00000264709 SETD1AO15047 1707 aaKnown RBP12.27□□□□□ -0.44
DNMT3A-201ENST00000264709 GOLGA8MH3BSY2 632 aa12.27□□□□□ -0.45
DNMT3A-201ENST00000264709 CDH2P19022 906 aaPredicted RBP12.27□□□□□ -0.45
DNMT3A-201ENST00000264709 SPDYAQ5MJ70 313 aa12.27□□□□□ -0.45
DNMT3A-201ENST00000264709 EMC10Q5UCC4 262 aa12.27□□□□□ -0.45
DNMT3A-201ENST00000264709 LVRNQ6Q4G3 990 aa12.27□□□□□ -0.45
DNMT3A-201ENST00000264709 KMT5AQ9NQR1 393 aa12.27□□□□□ -0.45
DNMT3A-201ENST00000264709 MYMKA6NI61 221 aa12.27□□□□□ -0.45
DNMT3A-201ENST00000264709 PDE2AO00408 941 aaPredicted RBP12.27□□□□□ -0.45
DNMT3A-201ENST00000264709 KRT75O95678 551 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms