RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 NAGPAQ9UK23 515 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 ZNF677Q86XU0 584 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 CBWD2Q8IUF1 395 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 OSBPL8Q9BZF1 889 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 VIPAS39Q9H9C1 493 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 FAM49BQ9NUQ9 324 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 FER1L4A9Z1Z3 1794 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 KCNN4O15554 427 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 CD4P01730 458 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 GTF2H1P32780 548 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 RECQLP46063 649 aaPredicted RBP14.76□□□□□ -0.05
CDH3-201ENST00000264012 COPS2P61201 443 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 SMAD1Q15797 465 aaKnown RBP14.76□□□□□ -0.05
CDH3-201ENST00000264012 CDKAL1Q5VV42 579 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 RAET1EQ8TD07 263 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 PARD3BQ8TEW8 1205 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 FAM163AQ96GL9 167 aaPredicted RBP14.76□□□□□ -0.05
CDH3-201ENST00000264012 TGS1Q96RS0 853 aaKnown RBP14.76□□□□□ -0.05
CDH3-201ENST00000264012 SP110Q9HB58 689 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 DDX4Q9NQI0 724 aaKnown RBP14.76□□□□□ -0.05
CDH3-201ENST00000264012 INTUQ9ULD6 942 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 FOXP2O15409 715 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 RAD51CO43502 376 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 GUCY2CP25092 1073 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 DGKDQ16760 1214 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 P3H1Q32P28 736 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 NBPF12Q5TAG4 269 aaPredicted RBP14.76□□□□□ -0.05
CDH3-201ENST00000264012 NLRP14Q86W24 1093 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 FBXO41Q8TF61 875 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 CHORDC1Q9UHD1 332 aaPredicted RBP14.76□□□□□ -0.05
CDH3-201ENST00000264012 APOBEC2Q9Y235 224 aaKnown RBP14.76□□□□□ -0.05
CDH3-201ENST00000264012 GAS2O43903 313 aaKnown RBP14.75□□□□□ -0.05
CDH3-201ENST00000264012 ITIH2P19823 946 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 NFKBIAP25963 317 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 SULT1E1P49888 294 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 HSD17B4P51659 736 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 HUNKP57058 714 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 TPI1P60174 286 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 FAM83AQ86UY5 434 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 ANKMY2Q8IV38 441 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 USP38Q8NB14 1042 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 RBM15Q96T37 977 aaKnown RBP eCLIP14.75□□□□□ -0.05
CDH3-201ENST00000264012 SLC13A1Q9BZW2 595 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 FOXN3O00409 490 aaPredicted RBP14.75□□□□□ -0.05
CDH3-201ENST00000264012 TRAPPC3O43617 180 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 BYSLQ13895 437 aaKnown RBP14.75□□□□□ -0.05
CDH3-201ENST00000264012 FIGNQ5HY92 759 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 ELMSAN1Q6PJG2 1045 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 JAMLQ86YT9 394 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 SAMD3Q8N6K7 520 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 SCFD1Q8WVM8 642 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 CHMP6Q96FZ7 201 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 CBWD1Q9BRT8 395 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 EFHD1Q9BUP0 239 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 PLEKHA5Q9HAU0 1116 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 DCTN4Q9UJW0 460 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 GRAP2O75791 330 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 RPSAP08865 295 aaKnown RBP14.75□□□□□ -0.05
CDH3-201ENST00000264012 NPTX2P47972 431 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 NLRP11P59045 1033 aaKnown RBP14.75□□□□□ -0.05
CDH3-201ENST00000264012 TGFB2P61812 414 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 TMTC4Q5T4D3 741 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 GTF3C4Q9UKN8 822 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 RPS6KA5O75582 802 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 CACNB2Q08289 660 aaPredicted RBP14.75□□□□□ -0.05
CDH3-201ENST00000264012 RNF219Q5W0B1 726 aaPredicted RBP14.75□□□□□ -0.05
CDH3-201ENST00000264012 ILDR1Q86SU0 546 aaPredicted RBP14.75□□□□□ -0.05
CDH3-201ENST00000264012 MED15Q96RN5 788 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 FGFR1OP2Q9NVK5 253 aa14.75□□□□□ -0.05
CDH3-201ENST00000264012 SPAG7O75391 227 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 GUCY1A3Q02108 690 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 ERO1BQ86YB8 467 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 SPATA2LQ8IUW3 424 aaPredicted RBP14.74□□□□□ -0.05
CDH3-201ENST00000264012 SYTL5Q8TDW5 730 aaPredicted RBP14.74□□□□□ -0.05
CDH3-201ENST00000264012 PDCD2LQ9BRP1 358 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 ZFYVE28Q9HCC9 887 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 F8W8V4 182 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 APRTP07741 180 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 SUPT20HL2P0C7V6 817 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 TYK2P29597 1187 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 DDR1Q08345 913 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 PCNX4Q63HM2 1172 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 CCNYL1Q8N7R7 359 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 PRPF31Q8WWY3 499 aaKnown RBP14.74□□□□□ -0.05
CDH3-201ENST00000264012 SERPINI1Q99574 410 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 CCDC195A0A1B0GUA6 201 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 RRN3P2A6NIE6 340 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 WTIPA6NIX2 430 aaPredicted RBP14.74□□□□□ -0.05
CDH3-201ENST00000264012 GRIK1P39086 918 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 SESN2P58004 480 aaPredicted RBP14.74□□□□□ -0.05
CDH3-201ENST00000264012 SEZ6Q53EL9 994 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 OR6P1Q8NGX9 317 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 HPDLQ96IR7 371 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 C9orf72Q96LT7 481 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 CYTH2Q99418 400 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 THAP2Q9H0W7 228 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 ABCF3Q9NUQ8 709 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 DFFAO00273 331 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 RALAP11233 206 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 HOXA10P31260 410 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms