RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 FAM32AQ9Y421 112 aaKnown RBP18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 ZNF335Q9H4Z2 1342 aaPredicted RBP18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 RAD51Q06609 339 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 SGSM3Q96HU1 749 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 XPO7Q9UIA9 1087 aaKnown RBP18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 PRPF4O43172 522 aaKnown RBP eCLIP18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 ANO4Q32M45 955 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 CEP78Q5JTW2 689 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 MB21D2Q8IYB1 491 aaPredicted RBP18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 ARL8AQ96BM9 186 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 RAB14P61106 215 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 SUSD4Q5VX71 490 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 THAP11Q96EK4 314 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 SPATA33Q96N06 139 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 FAM167BQ9BTA0 163 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 NSMCE4AQ9NXX6 385 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 KLHL2O95198 593 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 ARIH2O95376 493 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 TSGA10IPQ3SY00 556 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 ZNF772Q68DY9 489 aaPredicted RBP18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 TRAF7Q6Q0C0 670 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 SLC35G2Q8TBE7 412 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 WDR35Q9P2L0 1181 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 MYO3AQ8NEV4 1616 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 CDHR2Q9BYE9 1310 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 ANKRD65E5RJM6 399 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 AGBL2Q5U5Z8 902 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 FOPNLQ96NB1 174 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 MRPS26Q9BYN8 205 aaKnown RBP18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 TSC22D4Q9Y3Q8 395 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 MYO5BQ9ULV0 1848 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 ZNF197O14709 1029 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 KCNA2P16389 499 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 ITIH2P19823 946 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 CYFIP2Q96F07 1278 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 ATXN7L3BQ96GX2 97 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 SLC24A3Q9HC58 644 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 FAM217BQ9NTX9 383 aaPredicted RBP18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 HMOX2P30519 316 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 CDC42EP1Q00587 391 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 RABGAP1LQ5R372 815 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 SWSAP1Q6NVH7 229 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 EME1Q96AY2 570 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 KIF12Q96FN5 646 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 A0A1B0GTH6 734 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 TNPO2O14787 897 aaKnown RBP18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 SPDYAQ5MJ70 313 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 TTC30BQ8N4P2 665 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 MS4A14Q96JA4 679 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 WDR24Q96S15 920 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 CCSER1Q9C0I3 900 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 NMT2O60551 498 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 SERPINB9P50453 376 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 SH3GL2Q99962 352 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 CSPG5O95196 566 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 CCDC144BQ3MJ40 725 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 OXER1Q8TDS5 423 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 KRT35Q92764 455 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 TRPM8Q7Z2W7 1104 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 SH3KBP1Q96B97 665 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 TMEM245Q9H330 911 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 C10orf88Q9H8K7 445 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 COL15A1P39059 1388 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 SSU72P8A0A1W2PR75 194 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 USP17L10C9JJH3 530 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 DCUN1D1Q96GG9 259 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 MED15Q96RN5 788 aa18.35■□□□□ 0.53
NOTCH3-201ENST00000263388 ZNF200P98182 395 aaPredicted RBP18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 ANKS3Q6ZW76 656 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 TBC1D19Q8N5T2 526 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 KCNK16Q96T55 309 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 RMDN1Q96DB5 314 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 DYRK4Q9NR20 520 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 CDY2AQ9Y6F7 541 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 CDY1Q9Y6F8 540 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 F5H423 210 aaPredicted RBP18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 TEX33O43247 280 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 TAS2R42Q7RTR8 314 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 RANBP17Q9H2T7 1088 aaKnown RBP18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 MOSPD1Q9UJG1 213 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 MTO1Q9Y2Z2 717 aaKnown RBP18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 H0YC42 278 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 EYA4O95677 639 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 VCAM1P19320 739 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 TMED10P49755 219 aaKnown RBP18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 GLYCTKQ8IVS8 523 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 PDLIM2Q96JY6 352 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 DNAJC5BQ9UF47 199 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 CDYLQ9Y232 598 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 FCER1AP12319 257 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 C4BPBP20851 252 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 LSP1P33241 339 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 PDAP1Q13442 181 aaKnown RBP18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 SHC4Q6S5L8 630 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 AGR3Q8TD06 166 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 CDR2LQ86X02 465 aaPredicted RBP18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 OTULINQ96BN8 352 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 MMP19Q99542 508 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 C3orf70A6NLC5 250 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms