RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 ANKRD31Q8N7Z5 1873 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 SIPA1L1O43166 1804 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 FOCADQ5VW36 1801 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 EZRP15311 586 aaKnown RBP9.72□□□□□ -0.85
MSH4-201ENST00000263187 NSFP46459 744 aaKnown RBP9.72□□□□□ -0.85
MSH4-201ENST00000263187 ALDH5A1P51649 535 aaPredicted RBP9.72□□□□□ -0.85
MSH4-201ENST00000263187 DRG2P55039 364 aaKnown RBP9.72□□□□□ -0.85
MSH4-201ENST00000263187 GTF2BQ00403 316 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 DNAJC3Q13217 504 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 NAA25Q14CX7 972 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 NFIL3Q16649 462 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 P3H1Q32P28 736 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 MTERF2Q49AM1 385 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 ARHGEF16Q5VV41 709 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 IZUMO3Q5VZ72 239 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 B3GNT9Q6UX72 402 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 ANKMY2Q8IV38 441 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 FITM2Q8N6M3 262 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 CLEC4DQ8WXI8 215 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 DDX1Q92499 740 aaKnown RBP9.72□□□□□ -0.85
MSH4-201ENST00000263187 KLHL29Q96CT2 875 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 SNF8Q96H20 258 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 PDGFDQ9GZP0 370 aaPredicted RBP9.72□□□□□ -0.85
MSH4-201ENST00000263187 USP15Q9Y4E8 981 aaPredicted RBP9.72□□□□□ -0.85
MSH4-201ENST00000263187 RASA4BC9J798 803 aa9.71□□□□□ -0.85
MSH4-201ENST00000263187 RASA4O43374 803 aa9.71□□□□□ -0.85
MSH4-201ENST00000263187 KRT16P08779 473 aa9.71□□□□□ -0.85
MSH4-201ENST00000263187 DSG3P32926 999 aa9.71□□□□□ -0.85
MSH4-201ENST00000263187 RPL7AP62424 266 aaKnown RBP9.71□□□□□ -0.85
MSH4-201ENST00000263187 XRCC4Q13426 336 aa9.71□□□□□ -0.85
MSH4-201ENST00000263187 PLCB4Q15147 1175 aa9.71□□□□□ -0.85
MSH4-201ENST00000263187 CLEC16AQ2KHT3 1053 aa9.71□□□□□ -0.85
MSH4-201ENST00000263187 KIFAP3Q92845 792 aa9.71□□□□□ -0.85
MSH4-201ENST00000263187 TMEM237Q96Q45 408 aa9.71□□□□□ -0.85
MSH4-201ENST00000263187 KLF6Q99612 283 aaPredicted RBP9.71□□□□□ -0.85
MSH4-201ENST00000263187 SAYSD1Q9NPB0 183 aa9.71□□□□□ -0.85
MSH4-201ENST00000263187 GGA2Q9UJY4 613 aa9.71□□□□□ -0.85
MSH4-201ENST00000263187 PCDHB4Q9Y5E5 795 aa9.71□□□□□ -0.85
MSH4-201ENST00000263187 UBE4BO95155 1302 aa9.71□□□□□ -0.85
MSH4-201ENST00000263187 PTPRJQ12913 1337 aa9.71□□□□□ -0.85
MSH4-201ENST00000263187 GOLGA8RI6L899 631 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 ASAP2O43150 1006 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 TTC4O95801 387 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 GZMAP12544 262 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 HSPA6P17066 643 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 CLNS1AP54105 237 aaKnown RBP9.71□□□□□ -0.86
MSH4-201ENST00000263187 NLRP11P59045 1033 aaKnown RBP9.71□□□□□ -0.86
MSH4-201ENST00000263187 NOP14P78316 857 aaKnown RBP9.71□□□□□ -0.86
MSH4-201ENST00000263187 LACTB2Q53H82 288 aaPredicted RBP9.71□□□□□ -0.86
MSH4-201ENST00000263187 MCOLN2Q8IZK6 566 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 AGAP11Q8TF27 550 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 FNBP1Q96RU3 617 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 DCLK3Q9C098 648 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 NSRP1Q9H0G5 558 aaKnown RBP9.71□□□□□ -0.86
MSH4-201ENST00000263187 TMEM8AQ9HCN3 771 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 C1orf112Q9NSG2 853 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 KCND2Q9NZV8 630 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 HERC5Q9UII4 1024 aaKnown RBP9.71□□□□□ -0.86
MSH4-201ENST00000263187 CNOT7Q9UIV1 285 aaKnown RBP9.71□□□□□ -0.86
MSH4-201ENST00000263187 ZNF148Q9UQR1 794 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 ATAD5Q96QE3 1844 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 ZNF862O60290 1169 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 GAS8O95995 478 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 EGFRP00533 1210 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 FOXN2P32314 431 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 PIK3CAP42336 1068 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 ERFP50548 548 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 NCALDP61601 193 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 GAD2Q05329 585 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 BAATQ14032 418 aaPredicted RBP9.71□□□□□ -0.86
MSH4-201ENST00000263187 NEDD9Q14511 834 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 PREPLQ4J6C6 727 aaPredicted RBP9.71□□□□□ -0.86
MSH4-201ENST00000263187 TXNRD3NBQ6F5E7 133 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 ZNF449Q6P9G9 518 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 ARMC9Q7Z3E5 817 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 SPATA21Q7Z572 469 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 CENPTQ96BT3 561 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 RBM15Q96T37 977 aaKnown RBP eCLIP9.71□□□□□ -0.86
MSH4-201ENST00000263187 VPS37BQ9H9H4 285 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.71□□□□□ -0.86
MSH4-201ENST00000263187 ADAM22Q9P0K1 906 aa9.71□□□□□ -0.86
MSH4-201ENST00000263187 ICAM1P05362 532 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 KRT15P19012 456 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 IVDP26440 423 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 NRLP54845 237 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 CYP24A1Q07973 514 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 ORC1Q13415 861 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 PGM5Q15124 567 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 FLAD1Q8NFF5 587 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 LRRC19Q9H756 370 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 FEM1BQ9UK73 627 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 BRCA1P38398 1863 aaKnown RBP9.7□□□□□ -0.86
MSH4-201ENST00000263187 SRRM3A6NNA2 597 aaPredicted RBP9.7□□□□□ -0.86
MSH4-201ENST00000263187 FSCN2O14926 492 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 TLR3O15455 904 aaKnown RBP9.7□□□□□ -0.86
MSH4-201ENST00000263187 MGRN1O60291 552 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 DIAPH2O60879 1101 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 SUN1O94901 812 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 RFX1P22670 979 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 ELF1P32519 619 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms