RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 SP110Q9HB58 689 aa13.53□□□□□ -0.24
TTC39A-202ENST00000262676 ARHGEF3Q9NR81 526 aa13.53□□□□□ -0.24
TTC39A-202ENST00000262676 HDAC6Q9UBN7 1215 aa13.53□□□□□ -0.24
TTC39A-202ENST00000262676 GPC5P78333 572 aa13.52□□□□□ -0.24
TTC39A-202ENST00000262676 ANKRD40Q6AI12 368 aa13.52□□□□□ -0.24
TTC39A-202ENST00000262676 ILDR1Q86SU0 546 aaPredicted RBP13.52□□□□□ -0.24
TTC39A-202ENST00000262676 SNF8Q96H20 258 aa13.52□□□□□ -0.24
TTC39A-202ENST00000262676 NSMCE4AQ9NXX6 385 aa13.52□□□□□ -0.24
TTC39A-202ENST00000262676 PCDHB6Q9Y5E3 794 aa13.52□□□□□ -0.24
TTC39A-202ENST00000262676 C2CD2LO14523 706 aa13.52□□□□□ -0.24
TTC39A-202ENST00000262676 TOMM70O94826 608 aa13.52□□□□□ -0.24
TTC39A-202ENST00000262676 FKBP9O95302 570 aa13.52□□□□□ -0.24
TTC39A-202ENST00000262676 MMP1P03956 469 aa13.52□□□□□ -0.24
TTC39A-202ENST00000262676 CHRNA3P32297 505 aa13.52□□□□□ -0.24
TTC39A-202ENST00000262676 MAPRE1Q15691 268 aaKnown RBP13.52□□□□□ -0.24
TTC39A-202ENST00000262676 HEATR6Q6AI08 1181 aaKnown RBP13.52□□□□□ -0.24
TTC39A-202ENST00000262676 FKBP9P1Q75LS8 142 aa13.52□□□□□ -0.24
TTC39A-202ENST00000262676 SPATA21Q7Z572 469 aa13.52□□□□□ -0.24
TTC39A-202ENST00000262676 TTC13Q8NBP0 860 aa13.52□□□□□ -0.24
TTC39A-202ENST00000262676 PLEKHA8Q96JA3 519 aa13.52□□□□□ -0.24
TTC39A-202ENST00000262676 DONSONQ9NYP3 566 aa13.52□□□□□ -0.24
TTC39A-202ENST00000262676 SRLQ86TD4 932 aa13.52□□□□□ -0.25
TTC39A-202ENST00000262676 SEPT3Q9UH03 358 aa13.52□□□□□ -0.25
TTC39A-202ENST00000262676 DAGLAQ9Y4D2 1042 aa13.52□□□□□ -0.25
TTC39A-202ENST00000262676 DFFAO00273 331 aa13.52□□□□□ -0.25
TTC39A-202ENST00000262676 KLC1Q07866 573 aa13.52□□□□□ -0.25
TTC39A-202ENST00000262676 ZNF568Q3ZCX4 644 aa13.52□□□□□ -0.25
TTC39A-202ENST00000262676 NSUN7Q8NE18 718 aaKnown RBP13.52□□□□□ -0.25
TTC39A-202ENST00000262676 RIN3Q8TB24 985 aa13.52□□□□□ -0.25
TTC39A-202ENST00000262676 C1orf54Q8WWF1 131 aa13.52□□□□□ -0.25
TTC39A-202ENST00000262676 DDX47Q9H0S4 455 aaKnown RBP13.52□□□□□ -0.25
TTC39A-202ENST00000262676 HSPBP1Q9NZL4 362 aa13.52□□□□□ -0.25
TTC39A-202ENST00000262676 CCDC78A2IDD5 438 aa13.52□□□□□ -0.25
TTC39A-202ENST00000262676 HMOX2P30519 316 aa13.52□□□□□ -0.25
TTC39A-202ENST00000262676 HSPA9P38646 679 aaKnown RBP13.52□□□□□ -0.25
TTC39A-202ENST00000262676 SERPINB4P48594 390 aa13.52□□□□□ -0.25
TTC39A-202ENST00000262676 PRKCQQ04759 706 aa13.52□□□□□ -0.25
TTC39A-202ENST00000262676 STAG2Q8N3U4 1231 aa13.52□□□□□ -0.25
TTC39A-202ENST00000262676 C20orf96Q9NUD7 363 aaPredicted RBP13.52□□□□□ -0.25
TTC39A-202ENST00000262676 TMEM260Q9NX78 707 aa13.52□□□□□ -0.25
TTC39A-202ENST00000262676 SURF1Q15526 300 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 IFNEQ86WN2 208 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 ZNF564Q8TBZ8 553 aaPredicted RBP13.51□□□□□ -0.25
TTC39A-202ENST00000262676 C17orf80Q9BSJ5 609 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 CXorf56Q9H5V9 222 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 CNGB3Q9NQW8 809 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 MAP10Q9P2G4 905 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 FZD1Q9UP38 647 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 PIN4Q9Y237 131 aaKnown RBP13.51□□□□□ -0.25
TTC39A-202ENST00000262676 KIF24Q5T7B8 1368 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 UBXN8O00124 270 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 GTF2A2P52657 109 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 KIF23Q02241 960 aaPredicted RBP13.51□□□□□ -0.25
TTC39A-202ENST00000262676 KIZQ2M2Z5 673 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 NAALADL2Q58DX5 795 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 CDC42EP5Q6NZY7 148 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 OSBPL9Q96SU4 736 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 KLHL31Q9H511 634 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 DCP1AQ9NPI6 582 aaPredicted RBP13.51□□□□□ -0.25
TTC39A-202ENST00000262676 ABHD10Q9NUJ1 306 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 ZBTB22O15209 634 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 KLHL18O94889 574 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 ZNF667Q5HYK9 610 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 LINC00301Q8NCQ3 95 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 SH2D3AQ9BRG2 576 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 WWP1Q9H0M0 922 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 POLE3Q9NRF9 147 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 E2F8A0AVK6 867 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 LRRC53A6NM62 1247 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 ZBTB5O15062 677 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 PHKA2P46019 1235 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 PPP3CCP48454 512 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 OMA1Q96E52 524 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 TRIM54Q9BYV2 358 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 PAPOLBQ9NRJ5 636 aaKnown RBP13.51□□□□□ -0.25
TTC39A-202ENST00000262676 TRIM49BA6NDI0 452 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 CDH2P19022 906 aaPredicted RBP13.51□□□□□ -0.25
TTC39A-202ENST00000262676 TFDP2Q14188 446 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 TRIM16LQ309B1 348 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 PAN2Q504Q3 1202 aaKnown RBP13.51□□□□□ -0.25
TTC39A-202ENST00000262676 TMEM270Q6UE05 265 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 LRRC31Q6UY01 552 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 GIMAP8Q8ND71 665 aaPredicted RBP13.51□□□□□ -0.25
TTC39A-202ENST00000262676 C11orf70Q9BRQ4 267 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 IL1RL2Q9HB29 575 aa13.51□□□□□ -0.25
TTC39A-202ENST00000262676 USP42Q9H9J4 1324 aaKnown RBP13.5□□□□□ -0.25
TTC39A-202ENST00000262676 SUPT3HB4E1H0 165 aa13.5□□□□□ -0.25
TTC39A-202ENST00000262676 RNF103O00237 685 aa13.5□□□□□ -0.25
TTC39A-202ENST00000262676 MOCS2O96007 188 aaPredicted RBP13.5□□□□□ -0.25
TTC39A-202ENST00000262676 TGFB2P61812 414 aa13.5□□□□□ -0.25
TTC39A-202ENST00000262676 DEFB128Q7Z7B8 93 aa13.5□□□□□ -0.25
TTC39A-202ENST00000262676 RNF180Q86T96 592 aa13.5□□□□□ -0.25
TTC39A-202ENST00000262676 DIS3LQ8TF46 1054 aaKnown RBP13.5□□□□□ -0.25
TTC39A-202ENST00000262676 RNF26Q9BY78 433 aaPredicted RBP13.5□□□□□ -0.25
TTC39A-202ENST00000262676 DGKIO75912 1065 aa13.5□□□□□ -0.25
TTC39A-202ENST00000262676 SRP72O76094 671 aaKnown RBP13.5□□□□□ -0.25
TTC39A-202ENST00000262676 C6orf10Q5SRN2 563 aa13.5□□□□□ -0.25
TTC39A-202ENST00000262676 VPS50Q96JG6 964 aa13.5□□□□□ -0.25
TTC39A-202ENST00000262676 BHMT2Q9H2M3 363 aa13.5□□□□□ -0.25
TTC39A-202ENST00000262676 TAF1DQ9H5J8 278 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms