RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ANHXE9PGG2 379 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 ZNF197O14709 1029 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 SYN3O14994 580 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 TOM1L1O75674 476 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 FAM13AO94988 1023 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 MCM2P49736 904 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 SNW1Q13573 536 aaKnown RBP13.37□□□□□ -0.27
TRAF4-202ENST00000262396 ZNF280DQ6N043 979 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 PHLDB3Q6NSJ2 640 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 DSTYKQ6XUX3 929 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 C1orf186Q6ZWK4 172 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 PDZD4Q76G19 769 aaPredicted RBP13.37□□□□□ -0.27
TRAF4-202ENST00000262396 ADSSL1Q8N142 457 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 KCTD17Q8N5Z5 321 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 FGF14Q92915 247 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 KIF12Q96FN5 646 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 ZNF512Q96ME7 567 aaPredicted RBP13.37□□□□□ -0.27
TRAF4-202ENST00000262396 KXD1Q9BQD3 176 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 SLC2A4RGQ9NR83 387 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 HCFC1R1Q9NWW0 138 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 KCND2Q9NZV8 630 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 ARHGAP28Q9P2N2 729 aa13.37□□□□□ -0.27
TRAF4-202ENST00000262396 DNMT3BQ9UBC3 853 aaKnown RBP13.37□□□□□ -0.27
TRAF4-202ENST00000262396 NCAM2O15394 837 aa13.36□□□□□ -0.27
TRAF4-202ENST00000262396 TBCAO75347 108 aaKnown RBP13.36□□□□□ -0.27
TRAF4-202ENST00000262396 RHOP08100 348 aa13.36□□□□□ -0.27
TRAF4-202ENST00000262396 KCNE1P15382 129 aa13.36□□□□□ -0.27
TRAF4-202ENST00000262396 ATP2C1P98194 919 aaPredicted RBP13.36□□□□□ -0.27
TRAF4-202ENST00000262396 ROR1Q01973 937 aa13.36□□□□□ -0.27
TRAF4-202ENST00000262396 CACNB1Q02641 598 aaPredicted RBP13.36□□□□□ -0.27
TRAF4-202ENST00000262396 PPP2R3AQ06190 1150 aa13.36□□□□□ -0.27
TRAF4-202ENST00000262396 MLF2Q15773 248 aaPredicted RBP13.36□□□□□ -0.27
TRAF4-202ENST00000262396 KYAT1Q16773 422 aa13.36□□□□□ -0.27
TRAF4-202ENST00000262396 SEZ6Q53EL9 994 aa13.36□□□□□ -0.27
TRAF4-202ENST00000262396 SLC44A4Q53GD3 710 aa13.36□□□□□ -0.27
TRAF4-202ENST00000262396 LARP1BQ659C4 914 aaKnown RBP13.36□□□□□ -0.27
TRAF4-202ENST00000262396 ZPBP2Q6X784 338 aa13.36□□□□□ -0.27
TRAF4-202ENST00000262396 DAW1Q8N136 415 aa13.36□□□□□ -0.27
TRAF4-202ENST00000262396 MYCT1Q8N699 235 aa13.36□□□□□ -0.27
TRAF4-202ENST00000262396 SYT2Q8N9I0 419 aaPredicted RBP13.36□□□□□ -0.27
TRAF4-202ENST00000262396 ZNF461Q8TAF7 563 aa13.36□□□□□ -0.27
TRAF4-202ENST00000262396 SPIRE2Q8WWL2 714 aa13.36□□□□□ -0.27
TRAF4-202ENST00000262396 C18orf25Q96B23 403 aaPredicted RBP13.36□□□□□ -0.27
TRAF4-202ENST00000262396 TMX3Q96JJ7 454 aa13.36□□□□□ -0.27
TRAF4-202ENST00000262396 ZBTB45Q96K62 511 aaPredicted RBP13.36□□□□□ -0.27
TRAF4-202ENST00000262396 SLITRK6Q9H5Y7 841 aa13.36□□□□□ -0.27
TRAF4-202ENST00000262396 SPATA6Q9NWH7 488 aaPredicted RBP13.36□□□□□ -0.27
TRAF4-202ENST00000262396 CNTN3Q9P232 1028 aa13.36□□□□□ -0.27
TRAF4-202ENST00000262396 C2orf16Q68DN1 1984 aa13.36□□□□□ -0.27
TRAF4-202ENST00000262396 DENND4AQ7Z401 1863 aa13.36□□□□□ -0.27
TRAF4-202ENST00000262396 K7ENM7 598 aa13.35□□□□□ -0.27
TRAF4-202ENST00000262396 HNRNPDLO14979 420 aaKnown RBP13.35□□□□□ -0.27
TRAF4-202ENST00000262396 LAMTOR5O43504 91 aa13.35□□□□□ -0.27
TRAF4-202ENST00000262396 BMP15O95972 392 aa13.35□□□□□ -0.27
TRAF4-202ENST00000262396 POU2F2P09086 479 aa13.35□□□□□ -0.27
TRAF4-202ENST00000262396 CLTAP09496 248 aa13.35□□□□□ -0.27
TRAF4-202ENST00000262396 PRKCQQ04759 706 aa13.35□□□□□ -0.27
TRAF4-202ENST00000262396 SOX4Q06945 474 aaPredicted RBP13.35□□□□□ -0.27
TRAF4-202ENST00000262396 IL17AQ16552 155 aa13.35□□□□□ -0.27
TRAF4-202ENST00000262396 ARL6IP4Q66PJ3 421 aaKnown RBP13.35□□□□□ -0.27
TRAF4-202ENST00000262396 RSPO2Q6UXX9 243 aaPredicted RBP13.35□□□□□ -0.27
TRAF4-202ENST00000262396 KCNK18Q7Z418 384 aa13.35□□□□□ -0.27
TRAF4-202ENST00000262396 GPBP1Q86WP2 473 aa13.35□□□□□ -0.27
TRAF4-202ENST00000262396 NPAS3Q8IXF0 933 aa13.35□□□□□ -0.27
TRAF4-202ENST00000262396 C3orf58Q8NDZ4 430 aa13.35□□□□□ -0.27
TRAF4-202ENST00000262396 PJA1Q8NG27 643 aa13.35□□□□□ -0.27
TRAF4-202ENST00000262396 AK8Q96MA6 479 aa13.35□□□□□ -0.27
TRAF4-202ENST00000262396 ZMAT2Q96NC0 199 aaKnown RBP13.35□□□□□ -0.27
TRAF4-202ENST00000262396 TBC1D32Q96NH3 1257 aa13.35□□□□□ -0.27
TRAF4-202ENST00000262396 RPP25Q9BUL9 199 aaKnown RBP13.35□□□□□ -0.27
TRAF4-202ENST00000262396 FOXQ1Q9C009 403 aa13.35□□□□□ -0.27
TRAF4-202ENST00000262396 SEMA4AQ9H3S1 761 aa13.35□□□□□ -0.27
TRAF4-202ENST00000262396 RPF1Q9H9Y2 349 aaKnown RBP13.35□□□□□ -0.27
TRAF4-202ENST00000262396 PTPRHQ9HD43 1115 aa13.35□□□□□ -0.27
TRAF4-202ENST00000262396 GDE1Q9NZC3 331 aa13.35□□□□□ -0.27
TRAF4-202ENST00000262396 MRPS17Q9Y2R5 130 aaKnown RBP13.35□□□□□ -0.27
TRAF4-202ENST00000262396 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.35□□□□□ -0.27
TRAF4-202ENST00000262396 NPHP3-ACAD11A0A0J9YXS1 232 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 KANSL1LA0AUZ9 987 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 FAM170BA6NMN3 283 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 PAPLNO95428 1278 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 LMNAP02545 664 aaKnown RBP13.34□□□□□ -0.27
TRAF4-202ENST00000262396 CXCL8P10145 99 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 MAPTP10636 758 aaKnown RBP13.34□□□□□ -0.27
TRAF4-202ENST00000262396 MYL4P12829 197 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 ATF2P15336 505 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 YWHAHQ04917 246 aaPredicted RBP13.34□□□□□ -0.27
TRAF4-202ENST00000262396 SPAG1Q07617 926 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 ADCY1Q08828 1119 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 MAPK7Q13164 816 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 C8orf34Q49A92 452 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 TPGS2Q68CL5 300 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 SLC8B1Q6J4K2 584 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 ALKAL1Q6UXT8 129 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 HAUS6Q7Z4H7 955 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 C1orf210Q8IVY1 113 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 TMEM161BQ8NDZ6 487 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 DDX12PQ92771 950 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 KIF2CQ99661 725 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 NTPCRQ9BSD7 190 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms