RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 IGKV6-21A0A0C4DH24 114 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 RAD51CO43502 376 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 HBP1O60381 514 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 TOM1L1O75674 476 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 HEXIM1O94992 359 aaKnown RBP14.54□□□□□ -0.08
VMP1-201ENST00000262291 C22orf31O95567 290 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 SMPD1P17405 629 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 LIG3P49916 1009 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 MYL6P60660 151 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 NOP14P78316 857 aaKnown RBP14.54□□□□□ -0.08
VMP1-201ENST00000262291 MXD4Q14582 209 aaPredicted RBP14.54□□□□□ -0.08
VMP1-201ENST00000262291 ILDR2Q71H61 639 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 SND1Q7KZF4 910 aaKnown RBP eCLIP14.54□□□□□ -0.084e-7■■■□□ 17.7
VMP1-201ENST00000262291 TCP11Q8WWU5 503 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 DOCK3Q8IZD9 2030 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 SCN4AP35499 1836 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 TARSL2A2RTX5 802 aaKnown RBP14.54□□□□□ -0.08
VMP1-201ENST00000262291 DDX3YO15523 660 aaKnown RBP14.54□□□□□ -0.08
VMP1-201ENST00000262291 FAM189A1O60320 539 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 GRIN3BO60391 1043 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 GJB6O95452 261 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 GH1P01241 217 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 BRD2P25440 801 aaKnown RBP14.54□□□□□ -0.08
VMP1-201ENST00000262291 CARSP49589 748 aaKnown RBP14.54□□□□□ -0.08
VMP1-201ENST00000262291 ATF7IP2Q5U623 682 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 CST9Q5W186 159 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 MMS22LQ6ZRQ5 1243 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 SYCE1Q8N0S2 351 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 RIN2Q8WYP3 895 aaPredicted RBP14.54□□□□□ -0.08
VMP1-201ENST00000262291 KAT2BQ92831 832 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 CYFIP2Q96F07 1278 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 HES6Q96HZ4 224 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 SELENOOQ9BVL4 669 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 STIM2Q9P246 746 aa14.54□□□□□ -0.08
VMP1-201ENST00000262291 PLXNA1Q9UIW2 1896 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 PLXNB2O15031 1838 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 KRIT1O00522 736 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 FGGP02679 453 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 CXCL8P10145 99 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 COMTP21964 271 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 MNAT1P51948 309 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 EFNA5P52803 228 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 CLDN10P78369 228 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 CUL2Q13617 745 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 CDCA2Q69YH5 1023 aaPredicted RBP14.53□□□□□ -0.08
VMP1-201ENST00000262291 DDX42Q86XP3 938 aaKnown RBP eCLIP14.53□□□□□ -0.08
VMP1-201ENST00000262291 SCLT1Q96NL6 688 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 RNF19AQ9NV58 838 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 ABLIM1O14639 778 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 LDHAP00338 332 aaKnown RBP14.53□□□□□ -0.08
VMP1-201ENST00000262291 WEE2P0C1S8 567 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 GUCY2FP51841 1108 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 GCNT1Q02742 428 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 ORC1Q13415 861 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 LAMC2Q13753 1193 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.53□□□□□ -0.08
VMP1-201ENST00000262291 TADA2BQ86TJ2 420 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 FMNL3Q8IVF7 1028 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 BRSK2Q8IWQ3 736 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 MAML3Q96JK9 1138 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 KATNBL1Q9H079 304 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 FAM204AQ9H8W3 233 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 NFU1Q9UMS0 254 aa14.53□□□□□ -0.08
VMP1-201ENST00000262291 PGRMC1O00264 195 aaKnown RBP14.52□□□□□ -0.08
VMP1-201ENST00000262291 KRT19P08727 400 aa14.52□□□□□ -0.08
VMP1-201ENST00000262291 FAM153BP0C7A2 387 aa14.52□□□□□ -0.08
VMP1-201ENST00000262291 ACO1P21399 889 aaKnown RBP14.52□□□□□ -0.08
VMP1-201ENST00000262291 MAP2K2P36507 400 aa14.52□□□□□ -0.08
VMP1-201ENST00000262291 HUNKP57058 714 aa14.52□□□□□ -0.08
VMP1-201ENST00000262291 MCCD1P59942 119 aaPredicted RBP14.52□□□□□ -0.08
VMP1-201ENST00000262291 MBTD1Q05BQ5 628 aa14.52□□□□□ -0.08
VMP1-201ENST00000262291 FAM153CQ494X1 144 aa14.52□□□□□ -0.08
VMP1-201ENST00000262291 ZPBP2Q6X784 338 aa14.52□□□□□ -0.08
VMP1-201ENST00000262291 EFCAB13Q8IY85 973 aa14.52□□□□□ -0.08
VMP1-201ENST00000262291 ZNF564Q8TBZ8 553 aaPredicted RBP14.52□□□□□ -0.08
VMP1-201ENST00000262291 PBKQ96KB5 322 aa14.52□□□□□ -0.08
VMP1-201ENST00000262291 CELF4Q9BZC1 486 aaKnown RBP14.52□□□□□ -0.08
VMP1-201ENST00000262291 CNOT8Q9UFF9 292 aaKnown RBP14.52□□□□□ -0.08
VMP1-201ENST00000262291 FAM153AQ9UHL3 310 aa14.52□□□□□ -0.08
VMP1-201ENST00000262291 SUFUQ9UMX1 484 aa14.52□□□□□ -0.08
VMP1-201ENST00000262291 GPR25O00155 361 aa14.52□□□□□ -0.09
VMP1-201ENST00000262291 OGTO15294 1046 aa14.52□□□□□ -0.09
VMP1-201ENST00000262291 CLTAP09496 248 aa14.52□□□□□ -0.09
VMP1-201ENST00000262291 CLEC16AQ2KHT3 1053 aa14.52□□□□□ -0.09
VMP1-201ENST00000262291 FBXW10Q5XX13 1052 aa14.52□□□□□ -0.09
VMP1-201ENST00000262291 ANKRD23Q86SG2 305 aa14.52□□□□□ -0.09
VMP1-201ENST00000262291 RBBP8NLQ8NC74 664 aaPredicted RBP14.52□□□□□ -0.09
VMP1-201ENST00000262291 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.52□□□□□ -0.096e-8■■■■■ 29.7
VMP1-201ENST00000262291 C16orf70Q9BSU1 422 aa14.52□□□□□ -0.09
VMP1-201ENST00000262291 IFT122Q9HBG6 1241 aa14.52□□□□□ -0.09
VMP1-201ENST00000262291 AMACRQ9UHK6 382 aa14.52□□□□□ -0.09
VMP1-201ENST00000262291 DAAM1Q9Y4D1 1078 aa14.52□□□□□ -0.09
VMP1-201ENST00000262291 CEP350Q5VT06 3117 aa14.52□□□□□ -0.09
VMP1-201ENST00000262291 RAP1GAPP47736 663 aa14.51□□□□□ -0.09
VMP1-201ENST00000262291 PTENP60484 403 aa14.51□□□□□ -0.09
VMP1-201ENST00000262291 ACAD10Q6JQN1 1059 aa14.51□□□□□ -0.09
VMP1-201ENST00000262291 OR6J1Q8NGC5 347 aa14.51□□□□□ -0.09
VMP1-201ENST00000262291 CASKIN2Q8WXE0 1202 aa14.51□□□□□ -0.09
VMP1-201ENST00000262291 VTI1AQ96AJ9 217 aa14.51□□□□□ -0.09
VMP1-201ENST00000262291 FAM49AQ9H0Q0 323 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms