RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 GRAMD1BQ3KR37 738 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 TBC1D1Q86TI0 1168 aaPredicted RBP12.82□□□□□ -0.36
SPG11-201ENST00000261866 KRT7P08729 469 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 NCAM1P13591 858 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 FMR1Q06787 632 aaKnown RBP eCLIP12.82□□□□□ -0.363e-6■■■■□ 22.5
SPG11-201ENST00000261866 SPDYAQ5MJ70 313 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 ELMO2Q96JJ3 720 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 MAGEB5Q9BZ81 275 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 MTIF3Q9H2K0 278 aaKnown RBP12.82□□□□□ -0.36
SPG11-201ENST00000261866 METTL5Q9NRN9 209 aaKnown RBP12.82□□□□□ -0.36
SPG11-201ENST00000261866 ERAP1Q9NZ08 941 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 ADM5C9JUS6 153 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 ATXN3P54252 364 aaPredicted RBP12.82□□□□□ -0.36
SPG11-201ENST00000261866 USP49Q70CQ1 688 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 TARS2Q9BW92 718 aaKnown RBP12.82□□□□□ -0.36
SPG11-201ENST00000261866 TRPV6Q9H1D0 765 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 SEL1LQ9UBV2 794 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 HSD17B4P51659 736 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 CDKL3Q8IVW4 592 aaPredicted RBP12.82□□□□□ -0.36
SPG11-201ENST00000261866 TTC13Q8NBP0 860 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 SLC35G2Q8TBE7 412 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 SPIRE2Q8WWL2 714 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 ABHD8Q96I13 439 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 EPAS1Q99814 870 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 ADA2Q9NZK5 511 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 TRPM1Q7Z4N2 1603 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 TLR2O60603 784 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 GLT1D1Q96MS3 346 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 MAD2L2Q9UI95 211 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 TEKT2Q9UIF3 430 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 PQBP1O60828 265 aaKnown RBP12.82□□□□□ -0.36
SPG11-201ENST00000261866 APRTP07741 180 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 GGCXP38435 758 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 ITPRIPL1Q6GPH6 555 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 PDXDC1Q6P996 788 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 SLC30A10Q6XR72 485 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 RASGRP2Q7LDG7 609 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 PPP2R3CQ969Q6 453 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 KCNQ5Q9NR82 932 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 DONSONQ9NYP3 566 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 AMACRQ9UHK6 382 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 KDM6AO15550 1401 aaPredicted RBP12.82□□□□□ -0.36
SPG11-201ENST00000261866 GYS1P13807 737 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 GTF2H1P32780 548 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 HIF1AQ16665 826 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 B4GALNT2Q8NHY0 566 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 NYAP2Q9P242 653 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 TFR2Q9UP52 801 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 ARHGEF40Q8TER5 1519 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 PODXLO00592 558 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 SPTLC1O15269 473 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 DEUP1Q05D60 604 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 ADCY2Q08462 1091 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 GTF2H3Q13889 308 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 TRIM4Q9C037 500 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 RNF19AQ9NV58 838 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 APOBEC2Q9Y235 224 aaKnown RBP12.81□□□□□ -0.36
SPG11-201ENST00000261866 PFASO15067 1338 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 ADGRA2Q96PE1 1338 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 SLC37A4O43826 429 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 LIMA1Q9UHB6 759 aaKnown RBP12.81□□□□□ -0.36
SPG11-201ENST00000261866 KRT38O76015 456 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 TYK2P29597 1187 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 SGO1Q5FBB7 561 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 BTBD6Q96KE9 485 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 APOL5Q9BWW9 433 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 CCDC90BQ9GZT6 254 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 CTIFO43310 598 aaKnown RBP12.81□□□□□ -0.36
SPG11-201ENST00000261866 PMS1P54277 932 aaKnown RBP12.81□□□□□ -0.36
SPG11-201ENST00000261866 SPARCL1Q14515 664 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 NUDT18Q6ZVK8 323 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 IPMKQ8NFU5 416 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 PLA2G12BQ9BX93 195 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 IGFLR1Q9H665 355 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 MYO3AQ8NEV4 1616 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 RGS9BPQ6ZS82 235 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 GOLPH3Q9H4A6 298 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 ZSCAN32Q9NX65 697 aa12.81□□□□□ -0.36
SPG11-201ENST00000261866 DDX56Q9NY93 547 aaKnown RBP12.81□□□□□ -0.36
SPG11-201ENST00000261866 CENPAP49450 140 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 CASP4P49662 377 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 ANTXR2P58335 489 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 ACTR2P61160 394 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 KRT80Q6KB66 452 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 ACAD11Q709F0 780 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 TXNRD3Q86VQ6 643 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 SYT2Q8N9I0 419 aaPredicted RBP12.8□□□□□ -0.36
SPG11-201ENST00000261866 FAM136AQ96C01 138 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 SRPK1Q96SB4 655 aaKnown RBP12.8□□□□□ -0.36
SPG11-201ENST00000261866 YME1L1Q96TA2 773 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 TRIM51Q9BSJ1 452 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 FHOD1Q9Y613 1164 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 HLA-DRAP01903 254 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 SETSIPP0DME0 302 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 SLC9A1P19634 815 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 CUL1Q13616 776 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 SGMS1Q86VZ5 419 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 AGPAT5Q9NUQ2 364 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 KIF17Q9P2E2 1029 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 AK9Q5TCS8 1911 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms