RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 LOC100653049A0A140TA62 436 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 ESYT2A0FGR8 921 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 KRT34O76011 436 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 GH2P01242 217 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 ECE1P42892 770 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 SLC1A1P43005 524 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 AUHQ13825 339 aaKnown RBP17.12■□□□□ 0.33
SREBF1-201ENST00000261646 TMEM35BQ8NCS4 154 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 SLC20A1Q8WUM9 679 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 XAB2Q9HCS7 855 aaKnown RBP17.12■□□□□ 0.33
SREBF1-201ENST00000261646 TNNC2P02585 160 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 DLGAP5Q15398 846 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 LRRC55Q6ZSA7 311 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.11■□□□□ 0.33
SREBF1-201ENST00000261646 DENND3A2RUS2 1198 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 UPP2O95045 317 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 FECHP22830 423 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 EEF1B2P24534 225 aaKnown RBP17.11■□□□□ 0.33
SREBF1-201ENST00000261646 NCALDP61601 193 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 PPP1R2P3Q6NXS1 205 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 AGR3Q8TD06 166 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 ALKBH8Q96BT7 664 aaKnown RBP17.11■□□□□ 0.33
SREBF1-201ENST00000261646 SHCBP1LQ9BZQ2 653 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 ZBED4O75132 1171 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 PYGMP11217 842 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 GNA15P30679 374 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 CDAN1Q8IWY9 1227 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 VPS11Q9H270 941 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 TDRD3Q9H7E2 651 aaKnown RBP17.11■□□□□ 0.33
SREBF1-201ENST00000261646 WHRNQ9P202 907 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 SLC9A2Q9UBY0 812 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 GTF3C4Q9UKN8 822 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 CHMP2BQ9UQN3 213 aa17.11■□□□□ 0.33
SREBF1-201ENST00000261646 APBA3O96018 575 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 MKNK1Q9BUB5 465 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 JMJD4Q9H9V9 463 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 NGRNQ9NPE2 291 aaKnown RBP17.1■□□□□ 0.33
SREBF1-201ENST00000261646 ENTPD5O75356 428 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 IZUMO2Q6UXV1 221 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 KRT35Q92764 455 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 PURBQ96QR8 312 aaKnown RBP17.1■□□□□ 0.33
SREBF1-201ENST00000261646 APOL6Q9BWW8 343 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 IP6K2Q9UHH9 426 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 SYNJ2BP-COX16A0A087WUM0 186 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 A8MUI8 341 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 F5H6K3 240 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 RAD17O75943 681 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 UNC5CO95185 931 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 SNX16P57768 344 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 KLRC3Q07444 240 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 CCNYQ8ND76 341 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 ARHGEF26Q96DR7 871 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 FAM111AQ96PZ2 611 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 FOXP3Q9BZS1 431 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 NEUROG2Q9H2A3 272 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 HSPBP1Q9NZL4 362 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 COX16Q9P0S2 106 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 PI4KBQ9UBF8 816 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 CORO1CQ9ULV4 474 aaPredicted RBP17.1■□□□□ 0.33
SREBF1-201ENST00000261646 FLT1P17948 1338 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 A6NJR5 290 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 KIAA0391O15091 583 aaKnown RBP17.1■□□□□ 0.33
SREBF1-201ENST00000261646 PRPSAP2O60256 369 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 RARAP10276 462 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 EIF2AK2P19525 551 aaKnown RBP17.1■□□□□ 0.33
SREBF1-201ENST00000261646 YARSP54577 528 aaKnown RBP17.1■□□□□ 0.33
SREBF1-201ENST00000261646 TTLL12Q14166 644 aaPredicted RBP17.1■□□□□ 0.33
SREBF1-201ENST00000261646 PPP6R3Q5H9R7 873 aaPredicted RBP17.1■□□□□ 0.33
SREBF1-201ENST00000261646 FSCBQ5H9T9 825 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 PRPF39Q86UA1 669 aaKnown RBP17.1■□□□□ 0.33
SREBF1-201ENST00000261646 SCG3Q8WXD2 468 aaKnown RBP17.1■□□□□ 0.33
SREBF1-201ENST00000261646 SLC5A5Q92911 643 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 NMD3Q96D46 503 aaKnown RBP17.1■□□□□ 0.33
SREBF1-201ENST00000261646 RUSC1Q9BVN2 902 aa17.1■□□□□ 0.33
SREBF1-201ENST00000261646 ADCY3O60266 1144 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 SGPL1O95470 568 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 APOEP02649 317 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 ALDH1B1P30837 517 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 DSG1Q02413 1049 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 MFN1Q8IWA4 741 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 DNAAF3Q8N9W5 541 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 ATP6V0A1Q93050 837 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 GJA3Q9Y6H8 435 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 WASHC2DQ5SRD0 308 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 RARS2Q5T160 578 aaKnown RBP17.09■□□□□ 0.33
SREBF1-201ENST00000261646 GRAMD4Q6IC98 578 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 KLC2Q9H0B6 622 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 AGPAT3Q9NRZ7 376 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 NWD1Q149M9 1564 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 PTK7Q13308 1070 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 MTERF2Q49AM1 385 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 LACTB2Q53H82 288 aaPredicted RBP17.09■□□□□ 0.33
SREBF1-201ENST00000261646 OR6B2Q6IFH4 312 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 ARHGAP22Q7Z5H3 698 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 CKAP2Q8WWK9 683 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 RNF34Q969K3 372 aa17.09■□□□□ 0.33
SREBF1-201ENST00000261646 MRPL46Q9H2W6 279 aaKnown RBP17.09■□□□□ 0.33
SREBF1-201ENST00000261646 CYTH3O43739 400 aa17.08■□□□□ 0.33
SREBF1-201ENST00000261646 ATXN3P54252 364 aaPredicted RBP17.08■□□□□ 0.33
SREBF1-201ENST00000261646 GIT2Q14161 759 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms