RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 SMYD3Q9H7B4 428 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 USP24Q9UPU5 2620 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 MMEP08473 750 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 CKBP12277 381 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 SGSHP51688 502 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 SYCP1Q15431 976 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 NSMFQ6X4W1 530 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 SEPT14Q6ZU15 432 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 MRPL10Q7Z7H8 261 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 JOSD2Q8TAC2 188 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 MZB1Q8WU39 189 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 DDX27Q96GQ7 796 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 RSPO3Q9BXY4 272 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 NAGPAQ9UK23 515 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 H3BRB1 525 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 TRPA1O75762 1119 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 GCFC2P16383 781 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 EN2P19622 333 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 RAP1GAPP47736 663 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 SNAPC2Q13487 334 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 ITGA7Q13683 1181 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 EMC2Q15006 297 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 UPP1Q16831 310 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 FBXO46Q6PJ61 603 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 TUT1Q9H6E5 874 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 GOPCQ9HD26 462 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 CNTN3Q9P232 1028 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 PTPN22Q9Y2R2 807 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 NR3C1P04150 777 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 PEX3P56589 373 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 PTPN20Q4JDL3 420 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 RAB41Q5JT25 222 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 CROCCQ5TZA2 2017 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 GPBP1Q86WP2 473 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 HES6Q96HZ4 224 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 MRPL45Q9BRJ2 306 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 HSPBP1Q9NZL4 362 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 STK17AQ9UEE5 414 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 APCP25054 2843 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 A0A1W2PQC6 194 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 FAM92AA1XBS5 289 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 FAM153BP0C7A2 387 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 TGFB3P10600 412 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 PDCP20941 246 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 PHKA2P46019 1235 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 KCNJ6P48051 423 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 NDUFV1P49821 464 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 MYL5Q02045 173 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 FAM153CQ494X1 144 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 NSUN6Q8TEA1 469 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 ETNK2Q9NVF9 386 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 IL37Q9NZH6 218 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 FAM153AQ9UHL3 310 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 GOLGA6L4A6NEF3 574 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 GLP2RO95838 553 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 HLA-DOAP06340 250 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 FMO5P49326 533 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 CA9Q16790 459 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 VWA3BQ502W6 1294 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 GADL1Q6ZQY3 521 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 FUKQ8N0W3 1084 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 TRIML1Q8N9V2 468 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 GPRC5AQ8NFJ5 357 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 ZNF408Q9H9D4 720 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 ZDHHC18Q9NUE0 388 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 PANK4Q9NVE7 773 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 CFAP45Q9UL16 551 aa6.17□□□□□ -1.42
TOPBP1-201ENST00000260810 DDX11L8A8MPP1 907 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 PGGT1BP53609 377 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 OLIG2Q13516 323 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 FBXO47Q5MNV8 452 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 C9orf50Q5SZB4 431 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 RRAGAQ7L523 313 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 HINFPQ9BQA5 517 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 SPDYE3A6NKU9 549 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 G3V3G9 751 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 PDXKO00764 312 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 F7P08709 466 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 CYP2C9P11712 490 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 AKAP5P24588 427 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 KIF5BP33176 963 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 PLEKHG4Q58EX7 1191 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 PMF1Q6P1K2 205 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 SPATA18Q8TC71 538 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 MAF1Q9H063 256 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 PNMA8BQ9ULN7 279 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 CLEC4EQ9ULY5 219 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 ACTL7AQ9Y615 435 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 ZDBF2Q9HCK1 2354 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 CASC3O15234 703 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 PTGIRP43119 386 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 BYSLQ13895 437 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 DHX8Q14562 1220 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 SETMARQ53H47 684 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 KCTD16Q68DU8 428 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 SLC35F5Q8WV83 523 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 SNX27Q96L92 541 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 MMS19Q96T76 1030 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 PAGR1Q9BTK6 254 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 HOXC10Q9NYD6 342 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms