RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 Q3C1V9 767 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 TSGA10IPQ3SY00 556 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 DSTYKQ6XUX3 929 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 EFL1Q7Z2Z2 1120 aaKnown RBP5.04□□□□□ -1.6
RC3H1-201ENST00000258349 SLC35G2Q8TBE7 412 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 ORAI2Q96SN7 254 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 EPS8L2Q9H6S3 715 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 EMSYQ7Z589 1322 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 LOC102724159A0A0B4J2E5 919 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 LZTS3O60299 673 aaPredicted RBP5.04□□□□□ -1.6
RC3H1-201ENST00000258349 LARGE1O95461 756 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 ASNSP08243 561 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 PWP2Q15269 919 aaKnown RBP5.04□□□□□ -1.6
RC3H1-201ENST00000258349 CYTH1Q15438 398 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 NAB2Q15742 525 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 ADRM1Q16186 407 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 TRAF7Q6Q0C0 670 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 CDR2LQ86X02 465 aaPredicted RBP5.04□□□□□ -1.6
RC3H1-201ENST00000258349 ATPAF2Q8N5M1 289 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 MS4A14Q96JA4 679 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 DDX47Q9H0S4 455 aaKnown RBP5.04□□□□□ -1.6
RC3H1-201ENST00000258349 SMARCAL1Q9NZC9 954 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 PCM1Q15154 2024 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 TRPC5OSA6NMA1 111 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 POTECB2RU33 542 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 IL18RAPO95256 599 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 VHLP40337 213 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 PLA2G4AP47712 749 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 HSD17B4P51659 736 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 NR1I3Q14994 352 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 ANO4Q32M45 955 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 KBTBD12Q3ZCT8 623 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 NLGN1Q8N2Q7 840 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 NSL1Q96IY1 281 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 COA1Q9GZY4 146 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 LIMA1Q9UHB6 759 aaKnown RBP5.04□□□□□ -1.6
RC3H1-201ENST00000258349 PCDHA6Q9UN73 950 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 PCDHA8Q9Y5H6 950 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 NPHP4O75161 1426 aaPredicted RBP5.04□□□□□ -1.6
RC3H1-201ENST00000258349 DENND3A2RUS2 1198 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 TLR2O60603 784 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 VCAM1P19320 739 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 CDK17Q00537 523 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 SLC10A5Q5PT55 438 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 WLSQ5T9L3 541 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 FBXW10Q5XX13 1052 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 BTNL9Q6UXG8 535 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 DDX42Q86XP3 938 aaKnown RBP eCLIP5.04□□□□□ -1.6
RC3H1-201ENST00000258349 RNF135Q8IUD6 432 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 DYNLL2Q96FJ2 89 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 AGPAT1Q99943 283 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 EIF2AK1Q9BQI3 630 aaKnown RBP5.04□□□□□ -1.6
RC3H1-201ENST00000258349 WHRNQ9P202 907 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 PCDHGB4Q9UN71 923 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 VPS9D1Q9Y2B5 631 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 RGPD1P0DJD0 1748 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 ESYT3A0FGR9 886 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 USP27XA6NNY8 438 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 AKAP10O43572 662 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 ADCY3O60266 1144 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 CDC25AP30304 524 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 EFNA5P52803 228 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 CENPCQ03188 943 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 PDIA5Q14554 519 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 CRYMQ14894 314 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 TRAPPC11Q7Z392 1133 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 CCDC24Q8N4L8 307 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 C1orf54Q8WWF1 131 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 FOPNLQ96NB1 174 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 JPH1Q9HDC5 661 aaPredicted RBP5.04□□□□□ -1.6
RC3H1-201ENST00000258349 ABCF3Q9NUQ8 709 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 FARP1Q9Y4F1 1045 aaPredicted RBP5.04□□□□□ -1.6
RC3H1-201ENST00000258349 IGF2BP3O00425 579 aaKnown RBP eCLIP5.04□□□□□ -1.6
RC3H1-201ENST00000258349 QARSP47897 775 aaKnown RBP5.04□□□□□ -1.6
RC3H1-201ENST00000258349 RAB14P61106 215 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 TXNRD1Q16881 649 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 TJAP1Q5JTD0 557 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 OLFML2BQ68BL8 750 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 C19orf60Q96EN9 201 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 TMA16Q96EY4 203 aaKnown RBP5.04□□□□□ -1.6
RC3H1-201ENST00000258349 FAR2Q96K12 515 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 MAGEB18Q96M61 343 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 FRMD8P1Q9BZ68 369 aaPredicted RBP5.04□□□□□ -1.6
RC3H1-201ENST00000258349 RBAKQ9NYW8 714 aaPredicted RBP5.04□□□□□ -1.6
RC3H1-201ENST00000258349 USP42Q9H9J4 1324 aaKnown RBP5.04□□□□□ -1.6
RC3H1-201ENST00000258349 TPI1P60174 286 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 VSNL1P62760 191 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 STX3Q13277 289 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 LMTK2Q8IWU2 1503 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 CALML6Q8TD86 181 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 TEKT4Q8WW24 435 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 CNBD2Q96M20 576 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 AGBL1Q96MI9 1066 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 RBM15Q96T37 977 aaKnown RBP eCLIP5.04□□□□□ -1.6
RC3H1-201ENST00000258349 INPP5FQ9Y2H2 1132 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 SCN8AQ9UQD0 1980 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 NWD1Q149M9 1564 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 IQSEC2Q5JU85 1478 aa5.04□□□□□ -1.6
RC3H1-201ENST00000258349 CYP2D7A0A087X1C5 515 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 SPDYE5A6NIY4 337 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms