RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 CYP4F3Q08477 520 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 PROSER3Q2NL68 480 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 SYDE2Q5VT97 1194 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 ARMC6Q6NXE6 501 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 CYP2U1Q7Z449 544 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 PLEKHM2Q8IWE5 1019 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 ZCCHC7Q8N3Z6 543 aaKnown RBP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 SETDB2Q96T68 719 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 KRT12Q99456 494 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 C17orf80Q9BSJ5 609 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 C1orf50Q9BV19 199 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 PUS3Q9BZE2 481 aaKnown RBP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 CYP4F12Q9HCS2 524 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 PNPLA6Q8IY17 1366 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 ADAMTS13Q76LX8 1427 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 RICTORQ6R327 1708 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 C1orf232A0A0U1RR37 186 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 TRIP10Q15642 601 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 SH3D19Q5HYK7 790 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 GARNL3Q5VVW2 1013 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 RBM44Q6ZP01 1051 aaKnown RBP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 ALKBH8Q96BT7 664 aaKnown RBP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 PNKPQ96T60 521 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 TIPINQ9BVW5 301 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 ANO9A1A5B4 782 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 BOLA2-SMG1P6H3BVE0 249 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 DTNBO60941 627 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 TJP3O95049 919 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 MAGEA1P43355 309 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 USP11P51784 963 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 KPNA1P52294 538 aaPredicted RBP7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 RESTQ13127 1097 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 EZH2Q15910 746 aaKnown RBP7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 KCNK18Q7Z418 384 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 SLC26A7Q8TE54 656 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 STARD8Q92502 1023 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 AKAP1Q92667 903 aaKnown RBP eCLIP7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 ARL5BQ96KC2 179 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 TRIM47Q96LD4 638 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 CLEC4MQ9H2X3 399 aaPredicted RBP7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 ARHGAP26Q9UNA1 814 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 MRPS7Q9Y2R9 242 aaKnown RBP7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 V9GYQ6 96 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 B8ZZF3 427 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 M0R3G1 203 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 DBTP11182 482 aaKnown RBP7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 CHRNB1P11230 501 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 CDK7P50613 346 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 SMUG1Q53HV7 270 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 RRAGBQ5VZM2 374 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 SULT1C3Q6IMI6 304 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 BTNL9Q6UXG8 535 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 IKBIPQ70UQ0 350 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 INPP5DQ92835 1189 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 PPWD1Q96BP3 646 aaKnown RBP7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 MRRFQ96E11 262 aaKnown RBP7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 SLC6A15Q9H2J7 730 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 ETNK2Q9NVF9 386 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 ARMC1Q9NVT9 282 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 MLXQ9UH92 298 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 LIMA1Q9UHB6 759 aaKnown RBP7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 TMEM221A6NGB7 291 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 ZNF213O14771 459 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 NR1I2O75469 434 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 PDGFRBP09619 1106 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 PTDSS1P48651 473 aaKnown RBP7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 LGALS3BPQ08380 585 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 ZNF423Q2M1K9 1284 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 CTC1Q2NKJ3 1217 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 KLHL38Q2WGJ6 581 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 IGSF11Q5DX21 431 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 ZNF425Q6IV72 752 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 C11orf57Q6ZUT1 292 aaPredicted RBP7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 NOSTRINQ8IVI9 506 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 XXYLT1Q8NBI6 393 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 IRGQQ8WZA9 623 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 TMEM79Q9BSE2 394 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 CAB39LQ9H9S4 337 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 MPP6Q9NZW5 540 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 SLC12A6Q9UHW9 1150 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 NIP7Q9Y221 180 aaKnown RBP eCLIP7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 TNS3Q68CZ2 1445 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 BCL10O95999 233 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 CYP2E1P05181 493 aaPredicted RBP7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 PDHA2P29803 388 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 AK2P54819 239 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 GSTO1P78417 241 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 EDRF1Q3B7T1 1238 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 ANKS6Q68DC2 871 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 ANKMY2Q8IV38 441 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 MAML1Q92585 1016 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 FERMT2Q96AC1 680 aa7.09□□□□□ -1.27
PDGFRA-201ENST00000257290 CCDC182A6NF36 153 aa7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 IRS4O14654 1257 aaPredicted RBP7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 ITGB3P05106 788 aa7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 MDM2Q00987 491 aaPredicted RBP7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 RHAGQ02094 409 aa7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 TOP3AQ13472 1001 aaPredicted RBP7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 DNAL1Q4LDG9 190 aa7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 EPC2Q52LR7 807 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms