RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 OPLAHO14841 1288 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 CYP2D6P10635 497 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 GRM4Q14833 912 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 TRIM65Q6PJ69 517 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 UNC13DQ70J99 1090 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 LPCAT2Q7L5N7 544 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 RYBPQ8N488 228 aaPredicted RBP11.52□□□□□ -0.57
DCLK1-201ENST00000255448 ZNF564Q8TBZ8 553 aaPredicted RBP11.52□□□□□ -0.57
DCLK1-201ENST00000255448 RMDN3Q96TC7 470 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 BHMT2Q9H2M3 363 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 RXFP1Q9HBX9 757 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 ZHX2Q9Y6X8 837 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 FTLP02792 175 aaPredicted RBP11.52□□□□□ -0.57
DCLK1-201ENST00000255448 ST13P50502 369 aaKnown RBP11.52□□□□□ -0.57
DCLK1-201ENST00000255448 CACNB3P54284 484 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 RBM15Q96T37 977 aaKnown RBP eCLIP11.52□□□□□ -0.57
DCLK1-201ENST00000255448 MRPL1Q9BYD6 325 aaKnown RBP11.52□□□□□ -0.57
DCLK1-201ENST00000255448 LRRC4Q9HBW1 653 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 ZNF839A8K0R7 811 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 KCNQ2O43526 872 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 GGPS1O95749 300 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 MYBL2P10244 700 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 NUP107P57740 925 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 MTMR1Q13613 665 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 ZNF746Q6NUN9 644 aaPredicted RBP11.52□□□□□ -0.57
DCLK1-201ENST00000255448 ELMSAN1Q6PJG2 1045 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 KLF6Q99612 283 aaPredicted RBP11.52□□□□□ -0.57
DCLK1-201ENST00000255448 ERP44Q9BS26 406 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 DCUN1D5Q9BTE7 237 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 NUP85Q9BW27 656 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 CACYBPQ9HB71 228 aaKnown RBP11.52□□□□□ -0.57
DCLK1-201ENST00000255448 KIAA1586Q9HCI6 787 aa11.52□□□□□ -0.57
DCLK1-201ENST00000255448 R3HDM2Q9Y2K5 976 aaKnown RBP11.52□□□□□ -0.57
DCLK1-201ENST00000255448 LCA5LO95447 670 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 PSMC3P17980 439 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 YWHAHQ04917 246 aaPredicted RBP11.51□□□□□ -0.57
DCLK1-201ENST00000255448 Q3C1V9 767 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 TAF1BQ53T94 588 aaPredicted RBP11.51□□□□□ -0.57
DCLK1-201ENST00000255448 EPS8L3Q8TE67 593 aaKnown RBP11.51□□□□□ -0.57
DCLK1-201ENST00000255448 STK32AQ8WU08 396 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 CYLDQ9NQC7 956 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 PTPRUQ92729 1446 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 NEDD4P46934 1319 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 PNPLA7Q6ZV29 1317 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 PHF2O75151 1096 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 TSPAN9O75954 239 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 ZNF18P17022 549 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 HSPA13P48723 471 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 PRELPP51888 382 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 SLC34A1Q06495 639 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 SLC18A3Q16572 532 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 SCUBE1Q8IWY4 988 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 EXT2Q93063 718 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 SHCBP1LQ9BZQ2 653 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 KLHL4Q9C0H6 718 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 WNT8AQ9H1J5 351 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.51□□□□□ -0.57
DCLK1-201ENST00000255448 C20orf96Q9NUD7 363 aaPredicted RBP11.51□□□□□ -0.57
DCLK1-201ENST00000255448 STMN3Q9NZ72 180 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 SPDYE16A6NNV3 312 aaPredicted RBP11.51□□□□□ -0.57
DCLK1-201ENST00000255448 AP3B1O00203 1094 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 PJA2O43164 708 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 SRGNP10124 158 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 ARL4AP40617 200 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 CLK1P49759 484 aaKnown RBP11.51□□□□□ -0.57
DCLK1-201ENST00000255448 STX3Q13277 289 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 TRIM25Q14258 630 aaKnown RBP11.51□□□□□ -0.57
DCLK1-201ENST00000255448 SPDYE2Q495Y8 402 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 MICU2Q8IYU8 434 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 PPP2R3CQ969Q6 453 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 TUBGCP3Q96CW5 907 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 RBM41Q96IZ5 413 aaKnown RBP11.51□□□□□ -0.57
DCLK1-201ENST00000255448 MSTO1Q9BUK6 570 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 SLC38A10Q9HBR0 1119 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 MRGBPQ9NV56 204 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 HNRNPRO43390 633 aaKnown RBP11.51□□□□□ -0.57
DCLK1-201ENST00000255448 KLHL2O95198 593 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 SFNP31947 248 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 GPSM2P81274 684 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 EN1Q05925 392 aaPredicted RBP11.51□□□□□ -0.57
DCLK1-201ENST00000255448 INPP5AQ14642 412 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 WASHC2DQ5SRD0 308 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 PROM2Q8N271 834 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 CMTM5Q96DZ9 223 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 MANSC1Q9H8J5 431 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 APPL1Q9UKG1 709 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 MADDQ8WXG6 1647 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 QRICH2Q9H0J4 1663 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 CALB2P22676 271 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 HMOX2P30519 316 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 ERVK-24P63145 666 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 CTTNQ14247 550 aaKnown RBP11.51□□□□□ -0.57
DCLK1-201ENST00000255448 YTHDF3Q7Z739 585 aaKnown RBP11.51□□□□□ -0.57
DCLK1-201ENST00000255448 OR9Q1Q8NGQ5 310 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 PABPC3Q9H361 631 aaKnown RBP11.51□□□□□ -0.57
DCLK1-201ENST00000255448 NOL6Q9H6R4 1146 aaKnown RBP11.51□□□□□ -0.57
DCLK1-201ENST00000255448 NXF1Q9UBU9 619 aaKnown RBP11.51□□□□□ -0.57
DCLK1-201ENST00000255448 BLOC1S6Q9UL45 172 aa11.51□□□□□ -0.57
DCLK1-201ENST00000255448 NEMP1O14524 444 aa11.5□□□□□ -0.57
DCLK1-201ENST00000255448 ASAP2O43150 1006 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms