RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 CYFIP2Q96F07 1278 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 KREMEN1Q96MU8 473 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 RPS6KC1Q96S38 1066 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 DOCK1Q14185 1865 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 OGTO15294 1046 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 RECQL4O94761 1208 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 LYPLA2O95372 231 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 MLH1P40692 756 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 EFNA5P52803 228 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 PTENP60484 403 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 SLFN12LQ6IEE8 588 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 AADACL2Q6P093 401 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 MPZL3Q6UWV2 235 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 PLPPR4Q7Z2D5 763 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 CTU1Q7Z7A3 348 aaKnown RBP12.49□□□□□ -0.41
LIN28A-201ENST00000254231 GSPT2Q8IYD1 628 aaKnown RBP12.49□□□□□ -0.41
LIN28A-201ENST00000254231 TAF4BQ92750 862 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 UNC93B1Q9H1C4 597 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 CENPHQ9H3R5 247 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 HMX1Q9NP08 348 aaPredicted RBP12.49□□□□□ -0.41
LIN28A-201ENST00000254231 TUBGCP4Q9UGJ1 667 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 NOC2LQ9Y3T9 749 aaKnown RBP12.49□□□□□ -0.41
LIN28A-201ENST00000254231 F8VZ95 297 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 ACKR2O00590 384 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 FANCGO15287 622 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 ZNF771Q7L3S4 317 aaPredicted RBP12.49□□□□□ -0.41
LIN28A-201ENST00000254231 EFCAB13Q8IY85 973 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 SOCS4Q8WXH5 440 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 JPH2Q9BR39 696 aaPredicted RBP12.49□□□□□ -0.41
LIN28A-201ENST00000254231 HEMGNQ9BXL5 484 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 NUDT5Q9UKK9 219 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 ATG7O95352 703 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 GTF2H1P32780 548 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 LBX1P52954 281 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 C2orf54Q08AI8 447 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 ZNF667Q5HYK9 610 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 MORN1Q5T089 497 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 SCYL2Q6P3W7 929 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 ACOT1Q86TX2 421 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 GTF3C2Q8WUA4 911 aaPredicted RBP12.48□□□□□ -0.41
LIN28A-201ENST00000254231 IFT81Q8WYA0 676 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 NAPGQ99747 312 aaPredicted RBP12.48□□□□□ -0.41
LIN28A-201ENST00000254231 NIFKQ9BYG3 293 aaKnown RBP12.48□□□□□ -0.41
LIN28A-201ENST00000254231 SMYD3Q9H7B4 428 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 HCSTQ9UBK5 93 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 ST3GAL5Q9UNP4 418 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 F8W810 466 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 CCP110O43303 1012 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 DNAJB2P25686 324 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 HOXD10P28358 340 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 GNA15P30679 374 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 TNNT3P45378 269 aaPredicted RBP12.48□□□□□ -0.41
LIN28A-201ENST00000254231 ITGA7Q13683 1181 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 TARBP2Q15633 366 aaKnown RBP12.48□□□□□ -0.41
LIN28A-201ENST00000254231 ZNF484Q5JVG2 852 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 MARCH8Q5T0T0 291 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 PEX26Q7Z412 305 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 RNF180Q86T96 592 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 NOP9Q86U38 636 aaKnown RBP12.48□□□□□ -0.41
LIN28A-201ENST00000254231 LUC7LQ9NQ29 371 aaKnown RBP12.48□□□□□ -0.41
LIN28A-201ENST00000254231 COL6A3P12111 3177 aa12.48□□□□□ -0.41
LIN28A-201ENST00000254231 A0A0B4J269 797 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 ESYT3A0FGR9 886 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 MAGEB2O15479 319 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 PPP1R37O75864 691 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 TNNC1P63316 161 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 MBTD1Q05BQ5 628 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 DCUN1D2Q6PH85 259 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 CRELD2Q6UXH1 353 aaPredicted RBP12.47□□□□□ -0.41
LIN28A-201ENST00000254231 SAMD3Q8N6K7 520 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 COG1Q8WTW3 980 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 PGLYRP2Q96PD5 576 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 ALS2CR12Q96Q35 445 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 APOBEC3GQ9HC16 384 aaKnown RBP12.47□□□□□ -0.41
LIN28A-201ENST00000254231 MAGED2Q9UNF1 606 aaPredicted RBP12.47□□□□□ -0.41
LIN28A-201ENST00000254231 DDX3XO00571 662 aaKnown RBP eCLIP12.47□□□□□ -0.41
LIN28A-201ENST00000254231 TMEM132DQ14C87 1099 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 C1orf220Q5T0J3 134 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 GPR152Q8TDT2 470 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 ARHGEF26Q96DR7 871 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 ERLEC1Q96DZ1 483 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 NOX5Q96PH1 765 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 ADAM2Q99965 735 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 AGO3Q9H9G7 860 aaKnown RBP12.47□□□□□ -0.41
LIN28A-201ENST00000254231 HMGXB4Q9UGU5 601 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 SRRDQ9UH36 339 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 PCSK1NQ9UHG2 260 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 PASKQ96RG2 1323 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 PI4K2BG5E9Z4 385 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 B3GAT3O94766 335 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 ACRP10323 421 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 DYNLT1P63172 113 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 PURAQ00577 322 aaKnown RBP12.47□□□□□ -0.41
LIN28A-201ENST00000254231 SNX1Q13596 522 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 ZNF618Q5T7W0 954 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 MMS22LQ6ZRQ5 1243 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 EMC1Q8N766 993 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 RBBP8NLQ8NC74 664 aaPredicted RBP12.47□□□□□ -0.41
LIN28A-201ENST00000254231 NDRG1Q92597 394 aaKnown RBP12.47□□□□□ -0.41
LIN28A-201ENST00000254231 BHMTQ93088 406 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms