RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 RIMBP3Q9UFD9 1639 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 SRP72O76094 671 aaKnown RBP13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 CALB2P22676 271 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 SOX6P35712 828 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 ARSEP51690 589 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 SLC34A1Q06495 639 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 SLC29A2Q14542 456 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 IMPG1Q17R60 797 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 LVRNQ6Q4G3 990 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 RHPN2Q8IUC4 686 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 AGR3Q8TD06 166 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 ANKRD36BP1Q96IX9 119 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 AGBL1Q96MI9 1066 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 FANCEQ9HB96 536 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 RXFP1Q9HBX9 757 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 C1orf232A0A0U1RR37 186 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 ZNF233A6NK53 670 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 XPOTO43592 962 aaKnown RBP13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 GSTT1P30711 240 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 PPARGP37231 505 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 RFC5P40937 340 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 MTHFD1LQ6UB35 978 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 CRELD2Q6UXH1 353 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 PABPC3Q9H361 631 aaKnown RBP13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 NGRNQ9NPE2 291 aaKnown RBP13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 CYP2D7A0A087X1C5 515 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 TSC22D2O75157 780 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 TNFAIP8O95379 198 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 FXR1P51114 621 aaKnown RBP eCLIP13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 JAMLQ86YT9 394 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 UNC45AQ9H3U1 944 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 COPG2Q9UBF2 871 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 ATP10DQ9P241 1426 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 SMAPO00193 183 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 FASTKD1Q53R41 847 aaKnown RBP13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 SYCP2LQ5T4T6 812 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 HSPH1Q92598 858 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 ABCF3Q9NUQ8 709 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 BSDC1Q9NW68 430 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 KLHL8Q9P2G9 620 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 HEY2Q9UBP5 337 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 PHTF1Q9UMS5 762 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 CDY2AQ9Y6F7 541 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 CDY1Q9Y6F8 540 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 CPS1P31327 1500 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 CALB1P05937 261 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 RFX1P22670 979 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 CASP1P29466 404 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 SERPINB9P50453 376 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 POLGP54098 1239 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 TOB2Q14106 344 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 B3GNT6Q6ZMB0 384 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 IFNEQ86WN2 208 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 REXO1L1PQ8IX06 675 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 GUF1Q8N442 669 aaKnown RBP13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 GLMNQ92990 594 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 ULK4Q96C45 1275 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 DEPDC7Q96QD5 511 aa13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 DMAP1Q9NPF5 467 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 ADD3Q9UEY8 706 aaKnown RBP13.82□□□□□ -0.2
PCDHGA3-201ENST00000253812 AFF2P51816 1311 aa13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 EIF2S1P05198 315 aaKnown RBP13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 VIL1P09327 827 aaKnown RBP13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 USP38Q8NB14 1042 aa13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 CLEC4MQ9H2X3 399 aaPredicted RBP13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 TMBIM4Q9HC24 238 aa13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 CORO1CQ9ULV4 474 aaPredicted RBP13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 SERPINH1P50454 418 aaKnown RBP13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 NR1I3Q14994 352 aa13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 ARMC4Q5T2S8 1044 aa13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 CCDC81Q6ZN84 652 aa13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 C19orf60Q96EN9 201 aa13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 KMT5AQ9NQR1 393 aa13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 COMMD3-BMI1R4GMX3 469 aa13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 TESPA1A2RU30 521 aaPredicted RBP13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 CBFA2T3O75081 653 aa13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 TCN1P20061 433 aaPredicted RBP13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 RRM2BQ7LG56 351 aa13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 CCDC60Q8IWA6 550 aaPredicted RBP13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 DDIASQ8IXT1 998 aa13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 SEPT1Q8WYJ6 367 aa13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 E2F7Q96AV8 911 aa13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 GORASP1Q9BQQ3 440 aa13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 RPAP3Q9H6T3 665 aaPredicted RBP13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 EURLQ9NYK6 297 aa13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 DDX20Q9UHI6 824 aaKnown RBP13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 HPS5Q9UPZ3 1129 aa13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 R3HDM2Q9Y2K5 976 aaKnown RBP13.81□□□□□ -0.2
PCDHGA3-201ENST00000253812 KRT6AP02538 564 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 KRT6BP04259 564 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 MMP10P09238 476 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 KRT6CP48668 564 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 ATXN3P54252 364 aaPredicted RBP13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 GRAPQ13588 217 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 TP53BP2Q13625 1128 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 PPP6R3Q5H9R7 873 aaPredicted RBP13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 GPATCH4Q5T3I0 446 aaKnown RBP13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 THEMIS2Q5TEJ8 643 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 YTHDF3Q7Z739 585 aaKnown RBP13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 GLYCTKQ8IVS8 523 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms