RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 MON1BQ7L1V2 547 aa20.86■□□□□ 0.93
CDC42EP1-201ENST00000249014 ART4Q93070 314 aa20.86■□□□□ 0.93
CDC42EP1-201ENST00000249014 PCYT2Q99447 389 aa20.86■□□□□ 0.93
CDC42EP1-201ENST00000249014 NIFKQ9BYG3 293 aaKnown RBP20.86■□□□□ 0.93
CDC42EP1-201ENST00000249014 KCNG1Q9UIX4 513 aa20.86■□□□□ 0.93
CDC42EP1-201ENST00000249014 UBA1P22314 1058 aaKnown RBP20.86■□□□□ 0.93
CDC42EP1-201ENST00000249014 GBP1P32455 592 aa20.86■□□□□ 0.93
CDC42EP1-201ENST00000249014 SSTR3P32745 418 aaPredicted RBP20.86■□□□□ 0.93
CDC42EP1-201ENST00000249014 CUL2Q13617 745 aa20.86■□□□□ 0.93
CDC42EP1-201ENST00000249014 SEZ6Q53EL9 994 aa20.86■□□□□ 0.93
CDC42EP1-201ENST00000249014 TREML2Q5T2D2 321 aa20.86■□□□□ 0.93
CDC42EP1-201ENST00000249014 DENND2CQ68D51 928 aa20.86■□□□□ 0.93
CDC42EP1-201ENST00000249014 SLC7A3Q8WY07 619 aa20.86■□□□□ 0.93
CDC42EP1-201ENST00000249014 MSTO1Q9BUK6 570 aa20.86■□□□□ 0.93
CDC42EP1-201ENST00000249014 PARP2Q9UGN5 583 aa20.86■□□□□ 0.93
CDC42EP1-201ENST00000249014 UMODL1Q5DID0 1318 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 A0A0B4J269 797 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 GSTTP1A0A1W2PQM5 241 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 SRRM3A6NNA2 597 aaPredicted RBP20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 ECEL1O95672 775 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 FAM107AO95990 144 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 NSFP46459 744 aaKnown RBP20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 ALDH5A1P51649 535 aaPredicted RBP20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 HIRAP54198 1017 aaPredicted RBP20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 BPIFB4P59827 614 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 B4GALNT4Q76KP1 1039 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 PASD1Q8IV76 773 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 CHST13Q8NET6 341 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 OR5B17Q8NGF7 314 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 RUNDC3BQ96NL0 473 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 MTRF1LQ9UGC7 380 aaKnown RBP20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 ADGRA2Q96PE1 1338 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 PASKQ96RG2 1323 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 CNTNAP2Q9UHC6 1331 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 TP73O15350 636 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 MYBL1P10243 752 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 FGFR4P22455 802 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 SNX1Q13596 522 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 SGO2Q562F6 1265 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 SH3D19Q5HYK7 790 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 SLFN12LQ6IEE8 588 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 TMEM270Q6UE05 265 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 MAF1Q9H063 256 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 FAM107BQ9H098 131 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 CHST7Q9NS84 486 aa20.85■□□□□ 0.93
CDC42EP1-201ENST00000249014 TTLL13PA6NNM8 815 aa20.84■□□□□ 0.93
CDC42EP1-201ENST00000249014 O00370 1275 aa20.84■□□□□ 0.93
CDC42EP1-201ENST00000249014 TRAPPC3O43617 180 aa20.84■□□□□ 0.93
CDC42EP1-201ENST00000249014 FARP2O94887 1054 aaPredicted RBP20.84■□□□□ 0.93
CDC42EP1-201ENST00000249014 DRP2Q13474 957 aa20.84■□□□□ 0.93
CDC42EP1-201ENST00000249014 DLK2Q6UY11 383 aa20.84■□□□□ 0.93
CDC42EP1-201ENST00000249014 HOOK3Q86VS8 718 aa20.84■□□□□ 0.93
CDC42EP1-201ENST00000249014 ATG4AQ8WYN0 398 aa20.84■□□□□ 0.93
CDC42EP1-201ENST00000249014 DDX27Q96GQ7 796 aaKnown RBP20.84■□□□□ 0.93
CDC42EP1-201ENST00000249014 PLVAPQ9BX97 442 aa20.84■□□□□ 0.93
CDC42EP1-201ENST00000249014 BTBD7Q9P203 1132 aa20.84■□□□□ 0.93
CDC42EP1-201ENST00000249014 NUB1Q9Y5A7 615 aa20.84■□□□□ 0.93
CDC42EP1-201ENST00000249014 PCDHB4Q9Y5E5 795 aa20.84■□□□□ 0.93
CDC42EP1-201ENST00000249014 NOMO3P69849 1222 aa20.83■□□□□ 0.93
CDC42EP1-201ENST00000249014 CAPSQ13938 189 aa20.83■□□□□ 0.93
CDC42EP1-201ENST00000249014 PPP1R7Q15435 360 aa20.83■□□□□ 0.93
CDC42EP1-201ENST00000249014 TARBP2Q15633 366 aaKnown RBP20.83■□□□□ 0.93
CDC42EP1-201ENST00000249014 UHMK1Q8TAS1 419 aaKnown RBP20.83■□□□□ 0.93
CDC42EP1-201ENST00000249014 SLCO2A1Q92959 643 aa20.83■□□□□ 0.93
CDC42EP1-201ENST00000249014 TRIM11Q96F44 468 aa20.83■□□□□ 0.93
CDC42EP1-201ENST00000249014 CGRRF1Q99675 332 aa20.83■□□□□ 0.93
CDC42EP1-201ENST00000249014 C11orf70Q9BRQ4 267 aa20.83■□□□□ 0.93
CDC42EP1-201ENST00000249014 PAGR1Q9BTK6 254 aa20.83■□□□□ 0.93
CDC42EP1-201ENST00000249014 GPRC5DQ9NZD1 345 aa20.83■□□□□ 0.93
CDC42EP1-201ENST00000249014 USP2O75604 605 aaPredicted RBP20.83■□□□□ 0.92
CDC42EP1-201ENST00000249014 LDHAP00338 332 aaKnown RBP20.83■□□□□ 0.92
CDC42EP1-201ENST00000249014 CLTAP09496 248 aa20.83■□□□□ 0.92
CDC42EP1-201ENST00000249014 GNA15P30679 374 aa20.83■□□□□ 0.92
CDC42EP1-201ENST00000249014 SLC1A1P43005 524 aa20.83■□□□□ 0.92
CDC42EP1-201ENST00000249014 KRT17Q04695 432 aa20.83■□□□□ 0.92
CDC42EP1-201ENST00000249014 LBX2Q6XYB7 198 aa20.83■□□□□ 0.92
CDC42EP1-201ENST00000249014 ABRAQ8N0Z2 381 aa20.83■□□□□ 0.92
CDC42EP1-201ENST00000249014 CNKSR2Q8WXI2 1034 aa20.83■□□□□ 0.92
CDC42EP1-201ENST00000249014 MTFR1LQ9H019 292 aa20.83■□□□□ 0.92
CDC42EP1-201ENST00000249014 GMNCA6NCL1 334 aa20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 PAEPP09466 180 aa20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 HARSP12081 509 aaKnown RBP20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 NOP14P78316 857 aaKnown RBP20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 MDM1Q8TC05 714 aa20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 RAPGEF5Q92565 580 aa20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 PGM2Q96G03 612 aa20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 SNCAIPQ9Y6H5 919 aa20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 A0A0G2JMZ2 1700 aa20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 A0A087WUV0 522 aaPredicted RBP20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 TLDC2A0PJX2 215 aa20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 SOWAHBA6NEL2 793 aa20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 SMIM23A6NLE4 172 aa20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 RIPK2O43353 540 aa20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 RARGP13631 454 aa20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 BYSLQ13895 437 aaKnown RBP20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 VGLL4Q14135 290 aa20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 TADA2BQ86TJ2 420 aa20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 RBBP8NLQ8NC74 664 aaPredicted RBP20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 TMEM134Q9H6X4 195 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms