RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 TUBGCP4Q9UGJ1 667 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 DPP7Q9UHL4 492 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 AGO2Q9UKV8 859 aaKnown RBP13.9□□□□□ -0.18
VPREB3-201ENST00000248948 DERAQ9Y315 318 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 USP15Q9Y4E8 981 aaPredicted RBP13.9□□□□□ -0.18
VPREB3-201ENST00000248948 A0A1B0GVL5 298 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 PVALEFA0A1B0GWK0 134 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 TISP43B9A030 160 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 TEX28O15482 410 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 GLUD1P00367 558 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 EPCAMP16422 314 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 FGFR3P22607 806 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 KLRC2P26717 231 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 ADSSP30520 456 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 LRPAP1P30533 357 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 SYKP43405 635 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 ZP2Q05996 745 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 KCNA1Q09470 495 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 FAM171A1Q5VUB5 890 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 SYCE2Q6PIF2 218 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 EPM2AIP1Q7L775 607 aaPredicted RBP13.89□□□□□ -0.19
VPREB3-201ENST00000248948 TAS1R1Q7RTX1 841 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 NT5DC4Q86YG4 428 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 ADHFE1Q8IWW8 467 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 SYCP3Q8IZU3 236 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 C3orf58Q8NDZ4 430 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 RIN2Q8WYP3 895 aaPredicted RBP13.89□□□□□ -0.19
VPREB3-201ENST00000248948 KIF12Q96FN5 646 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 FBXL18Q96ME1 805 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 NECTIN4Q96NY8 510 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 NECAB3Q96P71 396 aaPredicted RBP13.89□□□□□ -0.19
VPREB3-201ENST00000248948 S1PR5Q9H228 398 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 ASB7Q9H672 318 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 CIZ1Q9ULV3 898 aaPredicted RBP13.89□□□□□ -0.19
VPREB3-201ENST00000248948 C2CD2Q9Y426 696 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 SCN1AP35498 2009 aa13.89□□□□□ -0.19
VPREB3-201ENST00000248948 SYN3O14994 580 aa13.88□□□□□ -0.19
VPREB3-201ENST00000248948 IL18RAPO95256 599 aa13.88□□□□□ -0.19
VPREB3-201ENST00000248948 LDHAP00338 332 aaKnown RBP13.88□□□□□ -0.19
VPREB3-201ENST00000248948 CBX2Q14781 532 aaPredicted RBP13.88□□□□□ -0.19
VPREB3-201ENST00000248948 ZBTB6Q15916 424 aa13.88□□□□□ -0.19
VPREB3-201ENST00000248948 PSMD5Q16401 504 aa13.88□□□□□ -0.19
VPREB3-201ENST00000248948 BMT2Q1RMZ1 405 aa13.88□□□□□ -0.19
VPREB3-201ENST00000248948 CD300LGQ6UXG3 332 aa13.88□□□□□ -0.19
VPREB3-201ENST00000248948 HDAC7Q8WUI4 952 aa13.88□□□□□ -0.19
VPREB3-201ENST00000248948 C18orf25Q96B23 403 aaPredicted RBP13.88□□□□□ -0.19
VPREB3-201ENST00000248948 B3GALT6Q96L58 329 aa13.88□□□□□ -0.19
VPREB3-201ENST00000248948 BLZF1Q9H2G9 400 aa13.88□□□□□ -0.19
VPREB3-201ENST00000248948 ADAM7Q9H2U9 754 aa13.88□□□□□ -0.19
VPREB3-201ENST00000248948 MTRRQ9UBK8 725 aa13.88□□□□□ -0.19
VPREB3-201ENST00000248948 SERTAD1Q9UHV2 236 aa13.88□□□□□ -0.19
VPREB3-201ENST00000248948 LACTBL1A8MY62 500 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 PAPLNO95428 1278 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 PAX3P23760 479 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 AFMP43652 599 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 ACOT2P49753 483 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 NDUFA8P51970 172 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 SNRPFP62306 86 aaKnown RBP13.87□□□□□ -0.19
VPREB3-201ENST00000248948 CUL4BQ13620 913 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 TMEM132DQ14C87 1099 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 SPATA1Q5VX52 437 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 CES5AQ6NT32 575 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 ARMCX5Q6P1M9 558 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 C15orf39Q6ZRI6 1047 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 ANKS3Q6ZW76 656 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 BRSK2Q8IWQ3 736 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 FSIP1Q8NA03 581 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 GLIS3Q8NEA6 775 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 BEST2Q8NFU1 509 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 CMASQ8NFW8 434 aaPredicted RBP13.87□□□□□ -0.19
VPREB3-201ENST00000248948 LNX1Q8TBB1 728 aaPredicted RBP13.87□□□□□ -0.19
VPREB3-201ENST00000248948 PAGE5Q96GU1 130 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 CCDC34Q96HJ3 373 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 RHOBTB2Q9BYZ6 727 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 IKZF4Q9H2S9 585 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 MAN1C1Q9NR34 630 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 NUB1Q9Y5A7 615 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 BACE2Q9Y5Z0 518 aa13.87□□□□□ -0.19
VPREB3-201ENST00000248948 C19orf67A6NJJ6 358 aa13.86□□□□□ -0.19
VPREB3-201ENST00000248948 EXTL3O43909 919 aa13.86□□□□□ -0.19
VPREB3-201ENST00000248948 PRPF6O94906 941 aaKnown RBP13.86□□□□□ -0.19
VPREB3-201ENST00000248948 NFICP08651 508 aa13.86□□□□□ -0.19
VPREB3-201ENST00000248948 MCM4P33991 863 aa13.86□□□□□ -0.19
VPREB3-201ENST00000248948 MTHFRP42898 656 aa13.86□□□□□ -0.19
VPREB3-201ENST00000248948 AARSP49588 968 aaKnown RBP eCLIP13.86□□□□□ -0.19
VPREB3-201ENST00000248948 JADE1Q6IE81 842 aa13.86□□□□□ -0.19
VPREB3-201ENST00000248948 PRSS55Q6UWB4 352 aaPredicted RBP13.86□□□□□ -0.19
VPREB3-201ENST00000248948 CRELD2Q6UXH1 353 aaPredicted RBP13.86□□□□□ -0.19
VPREB3-201ENST00000248948 CYP26C1Q6V0L0 522 aa13.86□□□□□ -0.19
VPREB3-201ENST00000248948 CEP57Q86XR8 500 aa13.86□□□□□ -0.19
VPREB3-201ENST00000248948 GJD3Q8N144 294 aa13.86□□□□□ -0.19
VPREB3-201ENST00000248948 ZNF507Q8TCN5 953 aa13.86□□□□□ -0.19
VPREB3-201ENST00000248948 HPS3Q969F9 1004 aa13.86□□□□□ -0.19
VPREB3-201ENST00000248948 SUSD3Q96L08 255 aa13.86□□□□□ -0.19
VPREB3-201ENST00000248948 RIPOR3Q96MK2 946 aa13.86□□□□□ -0.19
VPREB3-201ENST00000248948 CBWD1Q9BRT8 395 aa13.86□□□□□ -0.19
VPREB3-201ENST00000248948 PHF7Q9BWX1 381 aaPredicted RBP13.86□□□□□ -0.19
VPREB3-201ENST00000248948 PLEKHA4Q9H4M7 779 aa13.86□□□□□ -0.19
VPREB3-201ENST00000248948 GDPD2Q9HCC8 539 aa13.86□□□□□ -0.19
VPREB3-201ENST00000248948 EXOC1Q9NV70 894 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms