RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 BACE1P56817 501 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 TAAR1Q96RJ0 339 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 SH2D3AQ9BRG2 576 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 EBF2Q9HAK2 575 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 KCNQ5Q9NR82 932 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 PPP2R3BQ9Y5P8 575 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 ATRNO75882 1429 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 ABLIM1O14639 778 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 KIAA0391O15091 583 aaKnown RBP11.62□□□□□ -0.55
COPA-201ENST00000241704 BAG2O95816 211 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 KRT15P19012 456 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 PBX1P40424 430 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 FKBP1CQ5VVH2 108 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 ZNF662Q6ZS27 426 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 AGO2Q9UKV8 859 aaKnown RBP11.62□□□□□ -0.55
COPA-201ENST00000241704 FAF1Q9UNN5 650 aaPredicted RBP11.62□□□□□ -0.55
COPA-201ENST00000241704 SCINQ9Y6U3 715 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 E7ENQ6 273 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 DR1Q01658 176 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 ENOSF1Q7L5Y1 443 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 SMC1BQ8NDV3 1235 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 FBXL13Q8NEE6 735 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 SLC8A2Q9UPR5 921 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 PIN4Q9Y237 131 aaKnown RBP11.62□□□□□ -0.55
COPA-201ENST00000241704 EIF3DO15371 548 aaKnown RBP eCLIP11.62□□□□□ -0.55
COPA-201ENST00000241704 GPC5P78333 572 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 QPCTQ16769 361 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 ZNF394Q53GI3 561 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 SGO2Q562F6 1265 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 FAM117BQ6P1L5 589 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 USP38Q8NB14 1042 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 DRAXINQ8NBI3 349 aaPredicted RBP11.62□□□□□ -0.55
COPA-201ENST00000241704 RDM1Q8NG50 284 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 GRAMD1AQ96CP6 724 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 HIC2Q96JB3 615 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 PACSIN2Q9UNF0 486 aaPredicted RBP11.62□□□□□ -0.55
COPA-201ENST00000241704 MAGEA13PA6NCF6 341 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 MIF4GDA9UHW6 222 aaKnown RBP11.62□□□□□ -0.55
COPA-201ENST00000241704 H7C0C1 242 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 TBXAS1P24557 533 aaPredicted RBP11.62□□□□□ -0.55
COPA-201ENST00000241704 ATP5OP48047 213 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 ZNF844Q08AG5 666 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 EARS2Q5JPH6 523 aaKnown RBP11.62□□□□□ -0.55
COPA-201ENST00000241704 IER5Q5VY09 327 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 ARMC3Q5W041 872 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 ERICH1Q86X53 443 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 MYLK4Q86YV6 388 aaPredicted RBP11.62□□□□□ -0.55
COPA-201ENST00000241704 CTAGE3PQ8IX95 158 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 PDCD7Q8N8D1 485 aaKnown RBP11.62□□□□□ -0.55
COPA-201ENST00000241704 GPRASP2Q96D09 838 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 LRRC37BQ96QE4 947 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.62□□□□□ -0.559e-9■■□□□ 13.8
COPA-201ENST00000241704 ANKEF1Q9NU02 776 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 AFG3L2Q9Y4W6 797 aa11.62□□□□□ -0.55
COPA-201ENST00000241704 UPP2O95045 317 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 MYBP10242 640 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 CYP11B2P19099 503 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 ARL4AP40617 200 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 RINT1Q6NUQ1 792 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 TMEM35BQ8NCS4 154 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 PRCCQ92733 491 aaPredicted RBP11.61□□□□□ -0.55
COPA-201ENST00000241704 TUBB6Q9BUF5 446 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 RHBDL2Q9NX52 303 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 ADAM22Q9P0K1 906 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 DIS3Q9Y2L1 958 aaKnown RBP11.61□□□□□ -0.55
COPA-201ENST00000241704 A0A1W2PQJ5 194 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 ZSCAN5CA6NGD5 496 aaPredicted RBP11.61□□□□□ -0.55
COPA-201ENST00000241704 WNT10BO00744 389 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 BNIP3LO60238 219 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 DRD4P21917 467 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 CDC42EP1Q00587 391 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 LRRC14Q15048 493 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 DDX42Q86XP3 938 aaKnown RBP eCLIP11.61□□□□□ -0.556e-6■□□□□ 9.2
COPA-201ENST00000241704 CCDC68Q9H2F9 335 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 RBAKQ9NYW8 714 aaPredicted RBP11.61□□□□□ -0.55
COPA-201ENST00000241704 HSPBP1Q9NZL4 362 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 CNOT8Q9UFF9 292 aaKnown RBP11.61□□□□□ -0.55
COPA-201ENST00000241704 DISP2A7MBM2 1401 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 ADAMTSL3P82987 1691 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 SMIM22K7EJ46 135 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 PFDN6O15212 129 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 CYTH3O43739 400 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 ACADSP16219 412 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 MUTP22033 750 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 YY1P25490 414 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 SOX5P35711 763 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 VHLP40337 213 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 GPC3P51654 580 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 CDK17Q00537 523 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 DEUP1Q05D60 604 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 PLEKHH3Q7Z736 793 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 PALM2Q8IXS6 379 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 CERS5Q8N5B7 392 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 CPA4Q9UI42 421 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 UBE4BO95155 1302 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 TOPAZ1Q8N9V7 1692 aa11.61□□□□□ -0.55
COPA-201ENST00000241704 RTN2O75298 545 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 AP3M2P53677 418 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 ZNF699Q32M78 642 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 TMEM270Q6UE05 265 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms