RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CERS4Q9HA82 394 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 SUGCTQ9HAC7 445 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 SIX2Q9NPC8 291 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 INTUQ9ULD6 942 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 TNFSF13BQ9Y275 285 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 TTC3P53804 2025 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 NLRC5Q86WI3 1866 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 CNTNAP2Q9UHC6 1331 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 SMIM35A0A1B0GVV1 85 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 LPXNO60711 386 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 GJB5O95377 273 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 ADRB2P07550 413 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 SLC9A1P19634 815 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 POU3F3P20264 500 aaPredicted RBP14.24□□□□□ -0.13
SLIRP-201ENST00000238688 KLRC1P26715 233 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 KIF11P52732 1056 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 TUBB4BP68371 445 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 GCNT1Q02742 428 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 KLHL30Q0D2K2 578 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 KIF5AQ12840 1032 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 BMS1Q14692 1282 aaKnown RBP14.24□□□□□ -0.13
SLIRP-201ENST00000238688 GRIK4Q16099 956 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 SLC18A3Q16572 532 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 ASTE1Q2TB18 679 aaPredicted RBP14.24□□□□□ -0.13
SLIRP-201ENST00000238688 CBWD6Q4V339 395 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 CBWD3Q5JTY5 395 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 FAM26DQ5JW98 314 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 CBWD5Q5RIA9 395 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 MARCH8Q5T0T0 291 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 HGSNATQ68CP4 663 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 MPZL3Q6UWV2 235 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 RHPN2Q8IUC4 686 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 CBWD2Q8IUF1 395 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 BRSK2Q8IWQ3 736 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 NME8Q8N427 588 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 LMO3Q8TAP4 145 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 PPM1EQ8WY54 764 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 CHP1Q99653 195 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 PCIF1Q9H4Z3 704 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 ARHGAP20Q9P2F6 1191 aa14.24□□□□□ -0.13
SLIRP-201ENST00000238688 RALGAPA2Q2PPJ7 1873 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 BTNL10A8MVZ5 291 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 PJA2O43164 708 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 CAND2O75155 1236 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 IL18RAPO95256 599 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 TRIM49P0CI25 452 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 TRIM49CP0CI26 452 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 IGFBP4P22692 258 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 GTF2F1P35269 517 aaKnown RBP eCLIP14.23□□□□□ -0.13
SLIRP-201ENST00000238688 SOX5P35711 763 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 MFAP3P55082 362 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 NCBP1Q09161 790 aaKnown RBP14.23□□□□□ -0.13
SLIRP-201ENST00000238688 PRPF4BQ13523 1007 aaKnown RBP14.23□□□□□ -0.13
SLIRP-201ENST00000238688 RAPGEF1Q13905 1077 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 IKBKEQ14164 716 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 CCDC85BQ15834 202 aaPredicted RBP14.23□□□□□ -0.13
SLIRP-201ENST00000238688 TDRD12Q587J7 1177 aaKnown RBP14.23□□□□□ -0.13
SLIRP-201ENST00000238688 RUFY4Q6ZNE9 571 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 C15orf39Q6ZRI6 1047 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 FAM43BQ6ZT52 329 aaPredicted RBP14.23□□□□□ -0.13
SLIRP-201ENST00000238688 KIAA1328Q86T90 577 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 RPAINQ86UA6 219 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 NT5DC4Q86YG4 428 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 WDR49Q8IV35 697 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 RNF10Q8N5U6 811 aaKnown RBP14.23□□□□□ -0.13
SLIRP-201ENST00000238688 METTL13Q8N6R0 699 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 TSPAN18Q96SJ8 248 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 CGRRF1Q99675 332 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 IFIH1Q9BYX4 1025 aaKnown RBP14.23□□□□□ -0.13
SLIRP-201ENST00000238688 TMEM117Q9H0C3 514 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 NLRC4Q9NPP4 1024 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.23□□□□□ -0.13
SLIRP-201ENST00000238688 MTCH2Q9Y6C9 303 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 CITO14578 2027 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 ATG2AQ2TAZ0 1938 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 ANK1P16157 1881 aa14.23□□□□□ -0.13
SLIRP-201ENST00000238688 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.22□□□□□ -0.13
SLIRP-201ENST00000238688 ANO9A1A5B4 782 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 LRRIQ3A6PVS8 624 aaPredicted RBP14.22□□□□□ -0.13
SLIRP-201ENST00000238688 F8VZ95 297 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 TLL1O43897 1013 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 CHRNA1P02708 482 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 CTSHP09668 335 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 MCF2P10911 925 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 AXLP30530 894 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 EIF4A3P38919 411 aaKnown RBP14.22□□□□□ -0.13
SLIRP-201ENST00000238688 MBTD1Q05BQ5 628 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 PPP3CAQ08209 521 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 MGAT3Q09327 533 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 MTF1Q14872 753 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 ZACNQ401N2 412 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 C1orf220Q5T0J3 134 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 ATF7IP2Q5U623 682 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 PPP1R2P3Q6NXS1 205 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 TAF2Q6P1X5 1199 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 IRF2BP2Q7Z5L9 587 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 CD302Q8IX05 232 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 RDH13Q8NBN7 331 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 ZBTB10Q96DT7 871 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 NT5C1BQ96P26 610 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms