RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 HOMER3Q9NSC5 361 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 TBC1D22BQ9NU19 505 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 ASIC3Q9UHC3 531 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 ANAPC7Q9UJX3 599 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 TULP1O00294 542 aaPredicted RBP16.57■□□□□ 0.24
CTSD-201ENST00000236671 SNX3O60493 162 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 ITIH2P19823 946 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 PTK6Q13882 451 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 SLC39A4Q6P5W5 647 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 VSTM1Q6UX27 236 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 SMC1BQ8NDV3 1235 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 TMC2Q8TDI7 906 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 ARHGEF2Q92974 986 aaKnown RBP16.57■□□□□ 0.24
CTSD-201ENST00000236671 SNF8Q96H20 258 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 MFSD14AQ96MC6 490 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 FBXL18Q96ME1 805 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 TMEM120BA0PK00 339 aa16.56■□□□□ 0.24
CTSD-201ENST00000236671 CALCAP01258 141 aa16.56■□□□□ 0.24
CTSD-201ENST00000236671 UNGP13051 313 aaPredicted RBP16.56■□□□□ 0.24
CTSD-201ENST00000236671 CREB1P16220 341 aa16.56■□□□□ 0.24
CTSD-201ENST00000236671 MAPK4P31152 587 aa16.56■□□□□ 0.24
CTSD-201ENST00000236671 NPTX2P47972 431 aa16.56■□□□□ 0.24
CTSD-201ENST00000236671 LRRC14Q15048 493 aa16.56■□□□□ 0.24
CTSD-201ENST00000236671 XKR9Q5GH70 373 aa16.56■□□□□ 0.24
CTSD-201ENST00000236671 SYDE1Q6ZW31 735 aaPredicted RBP16.56■□□□□ 0.24
CTSD-201ENST00000236671 SYTL5Q8TDW5 730 aaPredicted RBP16.56■□□□□ 0.24
CTSD-201ENST00000236671 ABCF3Q9NUQ8 709 aa16.56■□□□□ 0.24
CTSD-201ENST00000236671 MROH7Q68CQ1 1323 aa16.56■□□□□ 0.24
CTSD-201ENST00000236671 DENND3A2RUS2 1198 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 CCNE2O96020 404 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 GTF2H1P32780 548 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 PSMC5P62195 406 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 SV2AQ7L0J3 742 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 TRMT1LQ7Z2T5 733 aaKnown RBP16.55■□□□□ 0.24
CTSD-201ENST00000236671 SCLT1Q96NL6 688 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 DCLK3Q9C098 648 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 AVENQ9NQS1 362 aaPredicted RBP16.55■□□□□ 0.24
CTSD-201ENST00000236671 CTNNAL1Q9UBT7 734 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 TBC1D12O60347 775 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 TTC4O95801 387 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 KRT5P13647 590 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 MAN1A1P33908 653 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 ITGA8P53708 1063 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 GCNT1Q02742 428 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 CYP24A1Q07973 514 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 DMP1Q13316 513 aaPredicted RBP16.55■□□□□ 0.24
CTSD-201ENST00000236671 FKBP1CQ5VVH2 108 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 HIBCHQ6NVY1 386 aaPredicted RBP16.55■□□□□ 0.24
CTSD-201ENST00000236671 MCF2L2Q86YR7 1114 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 MCOLN2Q8IZK6 566 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 MGARPQ8TDB4 240 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 BSNDQ8WZ55 320 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 ANKEF1Q9NU02 776 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 MCM8Q9UJA3 840 aa16.55■□□□□ 0.24
CTSD-201ENST00000236671 TCP11X1B4DZS4 312 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 ATP9AO75110 1047 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 EIF2AK2P19525 551 aaKnown RBP16.54■□□□□ 0.24
CTSD-201ENST00000236671 SCP2P22307 547 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 RRM1P23921 792 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 TTLL12Q14166 644 aaPredicted RBP16.54■□□□□ 0.24
CTSD-201ENST00000236671 TRIP13Q15645 432 aaPredicted RBP16.54■□□□□ 0.24
CTSD-201ENST00000236671 FAM133BQ5BKY9 247 aaKnown RBP16.54■□□□□ 0.24
CTSD-201ENST00000236671 CCDC63Q8NA47 563 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 DYDC1Q8WWB3 177 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 MAIP1Q8WWC4 291 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 DDX27Q96GQ7 796 aaKnown RBP16.54■□□□□ 0.24
CTSD-201ENST00000236671 CLMNQ96JQ2 1002 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 TACO1Q9BSH4 297 aaKnown RBP16.54■□□□□ 0.24
CTSD-201ENST00000236671 PI4K2AQ9BTU6 479 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 FGFR1OP2Q9NVK5 253 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 AGAP1Q9UPQ3 857 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 SORBS3O60504 671 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 TCEA3O75764 348 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 ATP6V1G2O95670 118 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 ATF2P15336 505 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 ATP5DP30049 168 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 JAK3P52333 1124 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 CAV1Q03135 178 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 PGM5Q15124 567 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 KYNUQ16719 465 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 ANO5Q75V66 913 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 ENOSF1Q7L5Y1 443 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 CNKSR2Q8WXI2 1034 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 TAAR1Q96RJ0 339 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 DNAJC17Q9NVM6 304 aaKnown RBP16.54■□□□□ 0.24
CTSD-201ENST00000236671 NINJ2Q9NZG7 142 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 R3HDM2Q9Y2K5 976 aaKnown RBP16.54■□□□□ 0.24
CTSD-201ENST00000236671 NEU2Q9Y3R4 380 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 USP15Q9Y4E8 981 aaPredicted RBP16.54■□□□□ 0.24
CTSD-201ENST00000236671 MYPNQ86TC9 1320 aa16.54■□□□□ 0.24
CTSD-201ENST00000236671 FOXO6A8MYZ6 492 aa16.53■□□□□ 0.24
CTSD-201ENST00000236671 WDR64B1ANS9 1081 aa16.53■□□□□ 0.24
CTSD-201ENST00000236671 GAS8O95995 478 aa16.53■□□□□ 0.24
CTSD-201ENST00000236671 SLC1A1P43005 524 aa16.53■□□□□ 0.24
CTSD-201ENST00000236671 KLF1Q13351 362 aaPredicted RBP16.53■□□□□ 0.24
CTSD-201ENST00000236671 MPP2Q14168 576 aa16.53■□□□□ 0.24
CTSD-201ENST00000236671 NEDD9Q14511 834 aa16.53■□□□□ 0.24
CTSD-201ENST00000236671 LLGL2Q6P1M3 1020 aa16.53■□□□□ 0.24
CTSD-201ENST00000236671 CEP57Q86XR8 500 aa16.53■□□□□ 0.24
CTSD-201ENST00000236671 GRK7Q8WTQ7 553 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms