RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 ARMCX5Q6P1M9 558 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 CC2D1AQ6P1N0 951 aaPredicted RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 GRASPQ7Z6J2 395 aaPredicted RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 DCP1BQ8IZD4 617 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 PCED1AQ9H1Q7 454 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 UNC45AQ9H3U1 944 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 FZD8Q9H461 694 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 NXF3Q9H4D5 531 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 TASP1Q9H6P5 420 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 DDX25Q9UHL0 483 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 APOBEC2Q9Y235 224 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 INSL5Q9Y5Q6 135 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 PLXNA4Q9HCM2 1894 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 TNFRSF10BO14763 440 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 DDHD2O94830 711 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 SSBP05455 408 aaKnown RBP eCLIP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 YWHABP31946 246 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 ARL2P36404 184 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 SFSWAPQ12872 951 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 PRPF4BQ13523 1007 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 SAFBQ15424 915 aaKnown RBP eCLIP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 NFE2Q16621 373 aaPredicted RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 PLA2G2CQ5R387 149 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 XKR5Q6UX68 686 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 CYP2U1Q7Z449 544 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 PALB2Q86YC2 1186 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 NT5DC4Q86YG4 428 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 LENG9Q96B70 501 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 ZNF274Q96GC6 653 aaPredicted RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 TBC1D32Q96NH3 1257 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 ASB16Q96NS5 453 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 CEP89Q96ST8 783 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 ESYT1Q9BSJ8 1104 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 NUSAP1Q9BXS6 441 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 TM6SF1Q9BZW5 370 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 TMEM134Q9H6X4 195 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 ZNF334Q9HCZ1 680 aaPredicted RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 KCND2Q9NZV8 630 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 TNFSF13BQ9Y275 285 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 TRDMT1O14717 391 aaKnown RBP2.51□□□□□ -2.01
PRKD3-201ENST00000234179 NPC1O15118 1278 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 SYPP08247 313 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 CHRNB1P11230 501 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 GDI1P31150 447 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 MPLP40238 635 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 MLH1P40692 756 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 EIF2DP41214 584 aaKnown RBP2.51□□□□□ -2.01
PRKD3-201ENST00000234179 PPP3CCP48454 512 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 RPL10AP62906 217 aaKnown RBP2.51□□□□□ -2.01
PRKD3-201ENST00000234179 RBM10P98175 930 aaKnown RBP2.51□□□□□ -2.01
PRKD3-201ENST00000234179 MTAPQ13126 283 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 SNW1Q13573 536 aaKnown RBP2.51□□□□□ -2.01
PRKD3-201ENST00000234179 NECTIN1Q15223 517 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 TAF12Q16514 161 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 BMP2KLQ5H9B9 411 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 N4BP2L1Q5TBK1 243 aaPredicted RBP2.51□□□□□ -2.01
PRKD3-201ENST00000234179 DIEXFQ68CQ4 756 aaKnown RBP2.51□□□□□ -2.01
PRKD3-201ENST00000234179 PARM1Q6UWI2 310 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 METTL23Q86XA0 190 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 SMG8Q8ND04 991 aaKnown RBP2.51□□□□□ -2.01
PRKD3-201ENST00000234179 SPPL2BQ8TCT7 592 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 PIBF1Q8WXW3 757 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 KCNB2Q92953 911 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 CLSTN3Q9BQT9 956 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 POLR3CQ9BUI4 534 aaPredicted RBP2.51□□□□□ -2.01
PRKD3-201ENST00000234179 VN1R3Q9BXE9 311 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 SRRTQ9BXP5 876 aaKnown RBP2.51□□□□□ -2.01
PRKD3-201ENST00000234179 ADAM33Q9BZ11 813 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 SLKQ9H2G2 1235 aaPredicted RBP2.51□□□□□ -2.01
PRKD3-201ENST00000234179 FAM124BQ9H5Z6 455 aaPredicted RBP2.51□□□□□ -2.01
PRKD3-201ENST00000234179 IFT122Q9HBG6 1241 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 ANO2Q9NQ90 1003 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 DNAJB4Q9UDY4 337 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 LHX6Q9UPM6 363 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 DERAQ9Y315 318 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 KIF3AQ9Y496 699 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 BCLAF3A2AJT9 711 aaKnown RBP2.51□□□□□ -2.01
PRKD3-201ENST00000234179 DCDC2BA2VCK2 349 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 CDC45O75419 566 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 POMCP01189 267 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 WEE2P0C1S8 567 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 FAM163BP0C2L3 166 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 HOXA11P31270 313 aaPredicted RBP2.51□□□□□ -2.01
PRKD3-201ENST00000234179 OR1D2P34982 312 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 RAP1GAPP47736 663 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 MRPS21P82921 87 aaKnown RBP2.51□□□□□ -2.01
PRKD3-201ENST00000234179 MBTD1Q05BQ5 628 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 ZNF252P-AS1Q0IIN9 211 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 TRIM29Q14134 588 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 SCUBE3Q8IX30 993 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 HDDC3Q8N4P3 179 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 GLIS3Q8NEA6 775 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 BEST2Q8NFU1 509 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 ETNPPLQ8TBG4 499 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 BPIFB1Q8TDL5 484 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 BCL7CQ8WUZ0 217 aaPredicted RBP2.51□□□□□ -2.01
PRKD3-201ENST00000234179 AUTS2Q8WXX7 1259 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 ZCCHC14Q8WYQ9 949 aaKnown RBP2.51□□□□□ -2.01
PRKD3-201ENST00000234179 OTUB2Q96DC9 234 aa2.51□□□□□ -2.01
PRKD3-201ENST00000234179 ZFP91Q96JP5 570 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms