RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 ERCC4Q92889 916 aaPredicted RBP14.95□□□□□ -0.02
VEGFA-201ENST00000230480 BORCS6Q96GS4 357 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 FBXL18Q96ME1 805 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 CLSTN3Q9BQT9 956 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 LRRC27Q9C0I9 530 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 KCTD10Q9H3F6 313 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 PCIF1Q9H4Z3 704 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 ENTPD7Q9NQZ7 604 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 HCFC2Q9Y5Z7 792 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 PTPRJQ12913 1337 aa14.94□□□□□ -0.02
VEGFA-201ENST00000230480 MYO10Q9HD67 2058 aa14.94□□□□□ -0.02
VEGFA-201ENST00000230480 SPTLC1O15269 473 aa14.94□□□□□ -0.02
VEGFA-201ENST00000230480 NR1I2O75469 434 aa14.94□□□□□ -0.02
VEGFA-201ENST00000230480 RPL17P18621 184 aaKnown RBP14.94□□□□□ -0.02
VEGFA-201ENST00000230480 GARTP22102 1010 aa14.94□□□□□ -0.02
VEGFA-201ENST00000230480 ALCAMQ13740 583 aa14.94□□□□□ -0.02
VEGFA-201ENST00000230480 MRPL58Q14197 206 aaKnown RBP14.94□□□□□ -0.02
VEGFA-201ENST00000230480 SPATA1Q5VX52 437 aa14.94□□□□□ -0.02
VEGFA-201ENST00000230480 SLFN12LQ6IEE8 588 aa14.94□□□□□ -0.02
VEGFA-201ENST00000230480 PRSS55Q6UWB4 352 aaPredicted RBP14.94□□□□□ -0.02
VEGFA-201ENST00000230480 PLEKHO2Q8TD55 490 aa14.94□□□□□ -0.02
VEGFA-201ENST00000230480 TOPORSQ9NS56 1045 aaPredicted RBP14.94□□□□□ -0.02
VEGFA-201ENST00000230480 CHMP5Q9NZZ3 219 aa14.94□□□□□ -0.02
VEGFA-201ENST00000230480 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.93□□□□□ -0.02
VEGFA-201ENST00000230480 ANO9A1A5B4 782 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 PODXLO00592 558 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 PIRO00625 290 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 C2CD2LO14523 706 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 MBTPS2O43462 519 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 B3GAT3O94766 335 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 RHOBTB3O94955 611 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 PAPLNO95428 1278 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 RPN1P04843 607 aaKnown RBP14.93□□□□□ -0.02
VEGFA-201ENST00000230480 ABCD1P33897 745 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 GLUD2P49448 558 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 AARSP49588 968 aaKnown RBP eCLIP14.93□□□□□ -0.021e-6■■■■□ 20.6
VEGFA-201ENST00000230480 CLCN4P51793 760 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 YARSP54577 528 aaKnown RBP14.93□□□□□ -0.02
VEGFA-201ENST00000230480 POU5F1Q01860 360 aaKnown RBP14.93□□□□□ -0.02
VEGFA-201ENST00000230480 CLUL1Q15846 466 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 FAM171A1Q5VUB5 890 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 ANKRD54Q6NXT1 300 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 APBB1IPQ7Z5R6 666 aaPredicted RBP14.93□□□□□ -0.02
VEGFA-201ENST00000230480 CBWD2Q8IUF1 395 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 BRSK2Q8IWQ3 736 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 NELFCDQ8IXH7 590 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 GPR65Q8IYL9 337 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 CEP57L1Q8IYX8 460 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 SMRP1Q8NCR6 262 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 POMGNT1Q8WZA1 660 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 SUSD6Q92537 303 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 CDCA3Q99618 268 aaPredicted RBP14.93□□□□□ -0.02
VEGFA-201ENST00000230480 PYM1Q9BRP8 204 aaKnown RBP14.93□□□□□ -0.02
VEGFA-201ENST00000230480 FAM213AQ9BRX8 229 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 RPF1Q9H9Y2 349 aaKnown RBP14.93□□□□□ -0.02
VEGFA-201ENST00000230480 AGPAT3Q9NRZ7 376 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 DMAC2Q9NW81 257 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 TSC2P49815 1807 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 DOCK8Q8NF50 2099 aa14.93□□□□□ -0.02
VEGFA-201ENST00000230480 CARNS1A5YM72 827 aa14.92□□□□□ -0.02
VEGFA-201ENST00000230480 CLIC2O15247 247 aa14.92□□□□□ -0.02
VEGFA-201ENST00000230480 NCK2O43639 380 aa14.92□□□□□ -0.02
VEGFA-201ENST00000230480 TADA2AO75478 443 aa14.92□□□□□ -0.02
VEGFA-201ENST00000230480 CYP3A5P20815 502 aa14.92□□□□□ -0.02
VEGFA-201ENST00000230480 TKTP29401 623 aaKnown RBP14.92□□□□□ -0.02
VEGFA-201ENST00000230480 PNOCQ13519 176 aa14.92□□□□□ -0.02
VEGFA-201ENST00000230480 USP41Q3LFD5 358 aa14.92□□□□□ -0.02
VEGFA-201ENST00000230480 LLGL2Q6P1M3 1020 aa14.92□□□□□ -0.02
VEGFA-201ENST00000230480 CLEC17AQ6ZS10 378 aa14.92□□□□□ -0.02
VEGFA-201ENST00000230480 C12orf56Q8IXR9 622 aa14.92□□□□□ -0.02
VEGFA-201ENST00000230480 C12orf76Q8N812 135 aaPredicted RBP14.92□□□□□ -0.02
VEGFA-201ENST00000230480 PIK3R5Q8WYR1 880 aa14.92□□□□□ -0.02
VEGFA-201ENST00000230480 KHSRPQ92945 711 aaKnown RBP eCLIP14.92□□□□□ -0.021e-9■■■□□ 15.1
VEGFA-201ENST00000230480 KIF12Q96FN5 646 aa14.92□□□□□ -0.02
VEGFA-201ENST00000230480 DDX27Q96GQ7 796 aaKnown RBP14.92□□□□□ -0.02
VEGFA-201ENST00000230480 UROC1Q96N76 676 aa14.92□□□□□ -0.02
VEGFA-201ENST00000230480 ASB7Q9H672 318 aa14.92□□□□□ -0.02
VEGFA-201ENST00000230480 TMEM206Q9H813 350 aa14.92□□□□□ -0.02
VEGFA-201ENST00000230480 PDE11AQ9HCR9 933 aa14.92□□□□□ -0.02
VEGFA-201ENST00000230480 EXTL3O43909 919 aa14.91□□□□□ -0.02
VEGFA-201ENST00000230480 MYL1P05976 194 aa14.91□□□□□ -0.02
VEGFA-201ENST00000230480 BMP6P22004 513 aa14.91□□□□□ -0.02
VEGFA-201ENST00000230480 RPL9P32969 192 aaKnown RBP14.91□□□□□ -0.02
VEGFA-201ENST00000230480 MATR3P43243 847 aaKnown RBP eCLIP14.91□□□□□ -0.02
VEGFA-201ENST00000230480 FAM160A1Q05DH4 1040 aa14.91□□□□□ -0.02
VEGFA-201ENST00000230480 POSTNQ15063 836 aa14.91□□□□□ -0.02
VEGFA-201ENST00000230480 KYAT1Q16773 422 aa14.91□□□□□ -0.02
VEGFA-201ENST00000230480 KNOP1Q1ED39 458 aaKnown RBP14.91□□□□□ -0.02
VEGFA-201ENST00000230480 C9orf57Q5W0N0 161 aa14.91□□□□□ -0.02
VEGFA-201ENST00000230480 PTCRAQ6ISU1 281 aaPredicted RBP14.91□□□□□ -0.02
VEGFA-201ENST00000230480 TMEM174Q8WUU8 243 aa14.91□□□□□ -0.02
VEGFA-201ENST00000230480 RIN2Q8WYP3 895 aaPredicted RBP14.91□□□□□ -0.02
VEGFA-201ENST00000230480 ZNF516Q92618 1163 aa14.91□□□□□ -0.02
VEGFA-201ENST00000230480 SUSD3Q96L08 255 aa14.91□□□□□ -0.02
VEGFA-201ENST00000230480 MRPL17Q9NRX2 175 aaKnown RBP14.91□□□□□ -0.02
VEGFA-201ENST00000230480 SLC38A7Q9NVC3 462 aa14.91□□□□□ -0.02
VEGFA-201ENST00000230480 HSPBP1Q9NZL4 362 aa14.91□□□□□ -0.02
VEGFA-201ENST00000230480 FNIP2Q9P278 1114 aa14.91□□□□□ -0.02
VEGFA-201ENST00000230480 UBQLN1Q9UMX0 589 aaKnown RBP14.91□□□□□ -0.02
VEGFA-201ENST00000230480 EXOC7Q9UPT5 735 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms