RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 POU5F1Q01860 360 aaKnown RBP18.05■□□□□ 0.48
GAPDH-201ENST00000229239 PTPROQ16827 1216 aa18.05■□□□□ 0.48
GAPDH-201ENST00000229239 CFAP58Q5T655 872 aa18.05■□□□□ 0.48
GAPDH-201ENST00000229239 MMP19Q99542 508 aa18.05■□□□□ 0.48
GAPDH-201ENST00000229239 HINFPQ9BQA5 517 aa18.05■□□□□ 0.48
GAPDH-201ENST00000229239 NUP85Q9BW27 656 aa18.05■□□□□ 0.48
GAPDH-201ENST00000229239 MRPL4Q9BYD3 311 aaKnown RBP18.05■□□□□ 0.48
GAPDH-201ENST00000229239 DDX47Q9H0S4 455 aaKnown RBP18.05■□□□□ 0.48
GAPDH-201ENST00000229239 RBPJLQ9UBG7 517 aa18.05■□□□□ 0.48
GAPDH-201ENST00000229239 TRPC6Q9Y210 931 aa18.05■□□□□ 0.48
GAPDH-201ENST00000229239 IGKV6-21A0A0C4DH24 114 aa18.04■□□□□ 0.48
GAPDH-201ENST00000229239 ESYT3A0FGR9 886 aa18.04■□□□□ 0.48
GAPDH-201ENST00000229239 ZSCAN5CA6NGD5 496 aaPredicted RBP18.04■□□□□ 0.48
GAPDH-201ENST00000229239 COMTP21964 271 aa18.04■□□□□ 0.48
GAPDH-201ENST00000229239 ACOT2P49753 483 aa18.04■□□□□ 0.48
GAPDH-201ENST00000229239 BIRC3Q13489 604 aa18.04■□□□□ 0.48
GAPDH-201ENST00000229239 MTMR3Q13615 1198 aa18.04■□□□□ 0.48
GAPDH-201ENST00000229239 ARHGEF6Q15052 776 aa18.04■□□□□ 0.48
GAPDH-201ENST00000229239 SPDYCQ5MJ68 293 aa18.04■□□□□ 0.48
GAPDH-201ENST00000229239 BRSK2Q8IWQ3 736 aa18.04■□□□□ 0.48
GAPDH-201ENST00000229239 ZBTB8OSQ8IWT0 167 aa18.04■□□□□ 0.48
GAPDH-201ENST00000229239 IQCKQ8N0W5 287 aa18.04■□□□□ 0.48
GAPDH-201ENST00000229239 TSEN2Q8NCE0 465 aaKnown RBP18.04■□□□□ 0.48
GAPDH-201ENST00000229239 FAM76AQ8TAV0 307 aa18.04■□□□□ 0.48
GAPDH-201ENST00000229239 CD101Q93033 1021 aa18.04■□□□□ 0.48
GAPDH-201ENST00000229239 FGD4Q96M96 766 aa18.04■□□□□ 0.48
GAPDH-201ENST00000229239 HAPLN2Q9GZV7 340 aa18.04■□□□□ 0.48
GAPDH-201ENST00000229239 CCDC113Q9H0I3 377 aa18.04■□□□□ 0.48
GAPDH-201ENST00000229239 CNTN6Q9UQ52 1028 aa18.04■□□□□ 0.48
GAPDH-201ENST00000229239 GOLGA6CA6NDK9 693 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 NOP56O00567 594 aaKnown RBP18.03■□□□□ 0.48
GAPDH-201ENST00000229239 PHACTR2O75167 634 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 TOM1L1O75674 476 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 GOLGA6DP0CG33 693 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 UNGP13051 313 aaPredicted RBP18.03■□□□□ 0.48
GAPDH-201ENST00000229239 ITGA4P13612 1032 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 CTNNA1P35221 906 aaKnown RBP18.03■□□□□ 0.48
GAPDH-201ENST00000229239 LMAN1P49257 510 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 PEX5P50542 639 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 GYS2P54840 703 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 CAP1Q01518 475 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 CUL2Q13617 745 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 MESDQ14696 234 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 LY6KQ17RY6 165 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 SEL1L2Q5TEA6 688 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 LEKR1Q6ZMV7 388 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 PRPF31Q8WWY3 499 aaKnown RBP18.03■□□□□ 0.48
GAPDH-201ENST00000229239 ALG3Q92685 438 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 PI4K2AQ9BTU6 479 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 GOLGA6AQ9NYA3 693 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 CNTNAP2Q9UHC6 1331 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 RASAL2Q9UJF2 1139 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 CLDN3O15551 220 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 PEX10O60683 326 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 RPS6KA5O75582 802 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 VNN1O95497 513 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 CHRNA3P32297 505 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 DRG2P55039 364 aaKnown RBP18.03■□□□□ 0.48
GAPDH-201ENST00000229239 LACTBP83111 547 aaPredicted RBP18.03■□□□□ 0.48
GAPDH-201ENST00000229239 LRIG3Q6UXM1 1119 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 WDR49Q8IV35 697 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 GLG1Q92896 1179 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 VCPIP1Q96JH7 1222 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.03■□□□□ 0.487e-8■■■■■ 81.1
GAPDH-201ENST00000229239 CALCOCO1Q9P1Z2 691 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 ANKFY1Q9P2R3 1169 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 CNOT8Q9UFF9 292 aaKnown RBP18.03■□□□□ 0.48
GAPDH-201ENST00000229239 AMACRQ9UHK6 382 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 PCDHA3Q9Y5H8 950 aa18.03■□□□□ 0.48
GAPDH-201ENST00000229239 ASB14A6NK59 587 aa18.02■□□□□ 0.48
GAPDH-201ENST00000229239 ERLIN2O94905 339 aa18.02■□□□□ 0.48
GAPDH-201ENST00000229239 CYP1A1P04798 512 aaPredicted RBP18.02■□□□□ 0.48
GAPDH-201ENST00000229239 SLC1A1P43005 524 aa18.02■□□□□ 0.48
GAPDH-201ENST00000229239 HLTFQ14527 1009 aaKnown RBP eCLIP18.02■□□□□ 0.48
GAPDH-201ENST00000229239 IMPG2Q9BZV3 1241 aa18.02■□□□□ 0.48
GAPDH-201ENST00000229239 SMARCAD1Q9H4L7 1026 aa18.02■□□□□ 0.48
GAPDH-201ENST00000229239 TXNRD2Q9NNW7 524 aa18.02■□□□□ 0.48
GAPDH-201ENST00000229239 ACP6Q9NPH0 428 aa18.02■□□□□ 0.48
GAPDH-201ENST00000229239 LCMT1Q9UIC8 334 aa18.02■□□□□ 0.48
GAPDH-201ENST00000229239 PNMA3Q9UL41 463 aa18.02■□□□□ 0.48
GAPDH-201ENST00000229239 MTUS1Q9ULD2 1270 aa18.02■□□□□ 0.48
GAPDH-201ENST00000229239 SPOPO43791 374 aa18.01■□□□□ 0.47
GAPDH-201ENST00000229239 MSCO60682 206 aa18.01■□□□□ 0.47
GAPDH-201ENST00000229239 PHF2O75151 1096 aa18.01■□□□□ 0.47
GAPDH-201ENST00000229239 CLTAP09496 248 aa18.01■□□□□ 0.47
GAPDH-201ENST00000229239 FAM153BP0C7A2 387 aa18.01■□□□□ 0.47
GAPDH-201ENST00000229239 CAPN2P17655 700 aa18.01■□□□□ 0.47
GAPDH-201ENST00000229239 ACO1P21399 889 aaKnown RBP18.01■□□□□ 0.47
GAPDH-201ENST00000229239 ECHS1P30084 290 aa18.01■□□□□ 0.47
GAPDH-201ENST00000229239 ACTN2P35609 894 aa18.01■□□□□ 0.47
GAPDH-201ENST00000229239 CENPCQ03188 943 aa18.01■□□□□ 0.47
GAPDH-201ENST00000229239 TFDP1Q14186 410 aa18.01■□□□□ 0.47
GAPDH-201ENST00000229239 MAPK6Q16659 721 aa18.01■□□□□ 0.47
GAPDH-201ENST00000229239 FAM153CQ494X1 144 aa18.01■□□□□ 0.47
GAPDH-201ENST00000229239 CCDC62Q6P9F0 684 aa18.01■□□□□ 0.47
GAPDH-201ENST00000229239 DHX37Q8IY37 1157 aaKnown RBP18.01■□□□□ 0.47
GAPDH-201ENST00000229239 MCOLN2Q8IZK6 566 aa18.01■□□□□ 0.47
GAPDH-201ENST00000229239 ZBTB45Q96K62 511 aaPredicted RBP18.01■□□□□ 0.47
GAPDH-201ENST00000229239 ZIM3Q96PE6 472 aa18.01■□□□□ 0.47
GAPDH-201ENST00000229239 FAM129AQ9BZQ8 928 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms